Trichinella spiralis: Tsp_05052
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Entry
Tsp_05052 CDS
T01609
Name
(RefSeq) putative irregular chiasm C-roughest protein
KO
K25874
Kirrel/Neph family protein
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tsp04515
]
Tsp_05052
Cell adhesion molecules [BR:
tsp04515
]
Immunoglobulin superfamily
Kirrel/Neph family
Tsp_05052
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_2
Ig_3
I-set
ig
V-set
Ig_2
C1-set
B-CoV_A_NSP1
Motif
Other DBs
NCBI-GeneID:
10912923
NCBI-ProteinID:
XP_003369645
LinkDB
All DBs
Position
Unknown
AA seq
314 aa
AA seq
DB search
MPFIAFLENFQMHGKHFISLLIFSTSSSASSCLLDNALMNCRFFVIIMVSLAISAEAEGS
QRFVEHPEETKVIVGQTAVLRCRIENQEGLVTWAKNGFILGTARSLPDFARYSMIGSDEL
GEYHLQIRNVTIQDDATYQCQATRLAAPTQVSLVARLAVLVPPSNAKLENIGSAITVSEG
DERIVSCISEGGKPKPSVHWFIASNRNGMDVIRAWHYSEDTVMINEQMISTVRSQLKYVP
KRTEDGHFLVCQVNHEALTTPLLTAVALTVLSIDLDLLQRNFPLFHCLLIPLYIFSEKLS
KACIVCFLIIIVEG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgccgtttatagcttttttggaaaattttcaaatgcatggcaaacatttcatttcattg
ctcatcttttccacatctagctcagcttcgtcttgccttcttgacaatgcactgatgaac
tgccgtttctttgttattattatggtctcgctggccatttcggccgaagctgaagggtct
caacgttttgtcgaacatcccgaagaaacgaaagtcatcgtcggccaaaccgctgtccta
aggtgcagaattgaaaatcaagaaggcctggttacgtgggctaagaatggatttattctt
ggtaccgcacgttccctgcccgactttgcgcgctattcaatgattggctccgacgaactt
ggtgaatatcatctgcaaataagaaacgtaacaatacaagacgatgcaacgtatcagtgc
caagctactagattggcggcgccgacgcaggtttctctcgtggcacgtttggccgtttta
gttcctccatcgaatgcaaaactggaaaacatcggctctgctatcactgtttcagaaggt
gatgaacgtatcgtatcttgtatatcagaaggcggaaagccgaaaccttctgtgcattgg
tttattgccagcaataggaatggtatggatgtgatacgcgcctggcattactctgaagat
actgtcatgatcaatgaacaaatgatttcgactgtacgaagtcagctcaaatatgtgcca
aaacggactgaagatggtcattttcttgtttgtcaagtgaatcatgaagcattgacaact
ccactgctgactgctgtagcgcttactgtgctctcaattgatctagatctcttgcaaagg
aattttccattattccattgtttgcttattcccttgtacatattttctgaaaagctgtca
aaagcatgcattgtatgctttttgattatcattgttgaaggataa
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