Trichinella spiralis: Tsp_05127
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Entry
Tsp_05127 CDS
T01609
Name
(RefSeq) serine/threonine-protein phosphatase 2A regulatory subunit B
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
tsp
Trichinella spiralis
Pathway
tsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Tsp_05127
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsp01009
]
Tsp_05127
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_05127
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_05127
Protein phosphatases and associated proteins [BR:
tsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
Tsp_05127
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
Tsp_05127
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
Tsp_05127
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_6
EF-hand_7
SU10_portal
EF-hand_1
Sigma70_ner
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
10908624
NCBI-ProteinID:
XP_003369717
UniProt:
E5SX39
LinkDB
All DBs
Position
Unknown
AA seq
438 aa
AA seq
DB search
MDKSSCEEIRSGALAHLIPVFYRPPVLETSESRHFMAAKLRDEARSLFLDRVGQQLMEPE
ELKLMMQEIQKWMSSRCESSTVDPTLINYEEFGQLRSLVSEKAKVFFTARTFCRLLRSDP
YGRIGVNELMQYIMRKTWICQTRISLGQYDVTGLGWLMERDVELYITDISATIPQLAHID
ESLMPFYTCMGYKRFFFFLDRKRVGKIRITDMIASGFVDELLELRDADNANNQLQDENSQ
DAENNNNAPVGKNWFSLANVLNVYGIYMNLDADGNGMLSKKELMSYGSGTLTEEFVGRVF
EEYMTFDGEMDFKGFVDFKLAMDNKQDPAGLAYFFRLFDIRQKGYLDSFSLNYFFRGIQR
AMEASGCMIVKFENINDELFDMIKPKKHGQITYDDLVRSKCGGVFINILIHLDGFLTYEN
REFSNLVAYTEEGDEADF
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatcttcttgcgaggaaatacgttctggtgctcttgcgcatttaattccagtc
ttctaccgacccccggtattggaaacgagcgaaagtagacattttatggctgctaaatta
cgtgacgaagcgagatctttatttttggatcgtgttggtcaacaactgatggaacctgaa
gagttgaaattgatgatgcaagaaattcaaaagtggatgtcttcgagatgtgaatcttca
acagtggatcccacgctgatcaattatgaagaatttggtcagttgcgatcgttggtatct
gagaaggcgaaagttttctttacggctcgcacattttgtcgtctgctgcgttctgatcct
tacggtagaataggcgtgaacgagttgatgcaatacataatgcgcaaaacttggatttgc
caaacaagaattagtcttggtcagtatgatgtgactggtcttggttggttgatggaacgt
gatgtcgaattgtacatcaccgatatcagtgcaacaattccacaattggcacatattgat
gaatcattgatgccattttacacttgcatgggatataaacgatttttctttttcctcgat
cgtaaaagagttggtaaaattagaattacggatatgatcgcttcaggatttgtggacgaa
ttgcttgaattgcgtgacgcagacaatgccaataatcagttgcaggacgaaaattcacaa
gatgcagaaaataataataatgcaccagttgggaaaaattggttcagcttggcaaatgtt
ttaaatgtgtacggtatttacatgaatttggatgccgatggcaatgggatgctttcgaaa
aaagaacttatgtcttacggtagtggaacgttgactgaagaatttgttggccgtgtattt
gaagagtacatgactttcgatggagagatggatttcaaaggctttgttgatttcaagctt
gcaatggataataagcaagatccggccggtttggcttatttttttcgacttttcgacatt
cgacagaaaggatatttagattcattttcgttgaattattttttccgtggtatacaacgt
gccatggaagctagtggttgtatgattgtgaaatttgaaaatatcaacgacgaactgttc
gacatgatcaaaccgaaaaagcacggccaaattacttatgacgatttagtgcgcagtaaa
tgtggcggcgtgttcatcaacattcttattcacttggacggatttcttacttatgaaaat
cgagaattttcaaatttggttgcttatactgaggaaggtgatgaagcagatttttga
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