KEGG   Trichinella spiralis: Tsp_05166
Entry
Tsp_05166         CDS       T01609                                 
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
tsp  Trichinella spiralis
Pathway
tsp04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    Tsp_05166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsp04131]
    Tsp_05166
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tsp04147]
    Tsp_05166
Membrane trafficking [BR:tsp04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    Tsp_05166
Exosome [BR:tsp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   Tsp_05166
SSDB
Motif
Pfam: EAP30
Other DBs
NCBI-GeneID: 10908663
NCBI-ProteinID: XP_003369756
LinkDB
Position
Unknown
AA seq 238 aa
MRRSVGVGAIQRKKESMLTALMDVFRDKLELFASKHQHEIRKNPTFRRQFLEMCATVGVD
PLASSKGFWSTKLNIGQFYYELAMQMIEVCMATAPYMTVGMTFRIHYYGRIVQTSNAFKR
QNPEDILKAAKSIEILGPGFSVIKMPKENTYLIKTTPKEISVDHLSVLQLGKENGFVSNE
MLAERLNWANYRTKTTEMLAEGTVWIDIESISLMLRQFRNLRHLSTMMSTQEVKESDL
NT seq 717 nt   +upstreamnt  +downstreamnt
atgcggagatcggttggagtaggtgctattcaacgtaaaaaggaatccatgttaacagct
ttaatggatgtttttcgtgacaaacttgaattatttgcctcaaagcatcagcatgaaatt
cgtaaaaatccaacatttagaaggcagtttttggaaatgtgcgcgacggttggcgtagat
ccacttgcctctagcaaaggattttggtcaaccaagttaaacataggtcaattttactat
gaacttgccatgcagatgattgaagtatgcatggctacagccccgtatatgactgttggt
atgacttttaggattcattactatggaagaattgtgcaaacgagtaatgcattcaagagg
cagaaccccgaggacatcctaaaagctgccaaaagcatagaaattcttggaccagggttt
tcagtaatcaagatgccaaaagaaaatacttacctaattaaaacaacacctaaagaaatt
agtgtcgatcatttgtctgttttacaacttggaaaggaaaatggctttgtttcaaatgaa
atgcttgctgaaagattaaactgggcaaattaccgaactaaaactactgaaatgctagca
gaaggcacggtgtggatagatatagaatctatttccttaatgttaagacaatttcgaaac
ttaaggcatctttctacaatgatgagcactcaagaagtaaaagaaagtgatttataa

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