Trichinella spiralis: Tsp_05167
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Entry
Tsp_05167 CDS
T01609
Name
(RefSeq) cuticle collagen 6 protein
KO
K08202
MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsp02000
]
Tsp_05167
Transporters [BR:
tsp02000
]
Solute carrier family (SLC)
SLC22: Organic cation/anion/zwitterion transporter
Tsp_05167
Major facilitator superfamily (MFS)
Organic acid transporters
Organic cation transporter (OCT) family [TC:
2.A.1.19
]
Tsp_05167
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Sugar_tr
MFS_1
Col_cuticle_N
TRI12
Motif
Other DBs
NCBI-GeneID:
10908664
NCBI-ProteinID:
XP_003369757
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
MVEIQKYIGSWGKYQCFIYILAFYSCVFDGIQTILPAFTLATANSRCRIPDLDEIWTNAT
YDTPFLLNISKQALGKLHFDSNKNIFCQYCPDSLTASENFTCELSNKSRKCYSGYVHDRS
VFYSTLTTEFDLICDRVWMKDLLKSLWMAGVLTGCLILGTLSDRYGRKGVFIVASVSQTI
LASTLPFLKSYLAVAIVQFITGMFSSVMELCDGLPRTVAGIGLQVAFAVGYIIDGLVAYY
IRRWDHIQWICSLVGIIVVVVVELRLLPESLRWLLHNGKKQQAIDLMQKIAKINKKQIPD
SVIKLQLTGAMSYYGLAWYTSDLPGDEYLNFFISGLVEMPAYIVSGIMFEYCGRRPSLAS
MYILAGMSCLASGLTPSEYKTIIIIIAMIGKSCISAAYAMAYNYSAEFFPTSIRNAGTGF
CSLCARIGTISAPQIHLLAHYAAPWVPITIFGCSAILCGIMNFALPETKGQCMPDTIEQA
VALINKKSTPANDNNKEASSSKKNNKVNASVELKNYNQHAYCAILLFTFCGQAATNVSSA
AQILCGHCSVNFYYFEPTSNMMNVTFAALEHNEFRLTDMPFSTKRSQYKKSAFLAIVFST
FASVLPAILIPIIFNRLQQFQTYMSDEVLSCHSQTLKMWTQLSNANEKLGAKSRLKRAWK
FGKWIDIDESNENAATPYQNYASPVTEDLDQHNSSTVYSTEIEKETEKCKCGIMQGLPGP
PGPMGEDGQNGKDGIPGEDGSPGKAGAILPPKKREICQLCLPGLTGPPGRAGVKGPPGPK
GLPGPPGVNGVPGERGMVGAEGPPGSVGECGPPGLAGKNGKVVQVMGPPGKPGTPGEQGP
KGIPGKPGRDGALGPPGLVGDPGEPGPPGLPGNPGAIGPPGEKGLTGKPGSCDHCPLPRM
APELQQQLLNCTP
NT seq
2742 nt
NT seq
+upstream
nt +downstream
nt
atggtagaaattcaaaaatatatcggttcgtgggggaaatatcaatgctttatatacata
ctggctttttattcttgcgtttttgatggaattcagacaattttacctgcattcactttg
gcaactgctaattctagatgcagaatacctgatttggatgaaatatggacaaatgcaact
tacgatactccatttttattaaatattagcaagcaagctttgggaaaattacattttgat
tcaaacaagaacatcttttgccaatattgtcctgattctttaactgcttcggaaaatttc
acttgtgaattgtcgaataaatctagaaaatgttactcaggttatgtgcatgacaggtct
gtattttattcgactttgactacagagttcgatttaatttgtgatcgagtatggatgaaa
gatctgttaaaatctttgtggatggctggcgttttaacaggttgtttgattcttggaacc
ctctcggacagatatggtcgaaagggcgttttcattgtggcttcagttagtcaaacaatt
ctagcaagcacattgccattcttaaaatcatatcttgccgtagctattgttcaatttatt
acaggaatgtttagcagtgtaatggaactgtgtgatggcttaccaagaacagttgcagga
attggactgcaagttgcttttgctgtcggatatataattgatggcctggtcgcatattac
atacgtcgttgggatcacatccagtggatatgctccttagttggaataatagttgttgtt
gttgttgaattaaggttgttgcctgagtcacttcgatggttgttgcacaatggcaaaaag
cagcaagcaatagatttaatgcaaaaaattgcaaaaataaacaaaaagcaaattcctgat
agtgttataaaattgcagcttactggagcaatgtcatattatggtttggcatggtacaca
agcgacttgccaggtgatgaatatttaaatttttttatatccggtttggtagaaatgcca
gcttatattgtttctggcattatgtttgaatattgtggacgaagaccatctttggcaagc
atgtacattttagccggaatgtcatgtttagcaagtggcttaactccaagcgaatacaaa
actattatcatcataatagcaatgatcgggaagtcatgcatttctgctgcatatgcaatg
gcatataattatagtgcagaattttttccgacatctatcagaaatgcaggaactggtttc
tgttcattgtgtgctcgaataggaacaatttctgcacctcaaattcatctcttggctcat
tatgcggcaccatgggtgcctataactatatttgggtgttctgcaattctttgtggaata
atgaactttgctctgcctgaaaccaaaggacaatgcatgccagataccattgaacaagcg
gtagcactaataaataaaaaaagtacgcctgcaaatgataataacaaagaagcatcgtca
tcaaagaaaaataataaagtcaatgcatcagtcgaattaaagaactacaaccaacacgca
tactgtgcgattttgttatttacattttgtggacaagctgctactaatgtttcgagcgca
gcacaaattctgtgcggtcactgttcggtcaacttttactattttgaacctaccagcaac
atgatgaatgtgacctttgcagctttggaacacaatgaatttcgtttaactgatatgcca
ttttcgacaaaacgttcacagtataaaaaaagtgcttttctagcaattgtttttagcaca
tttgcatctgttttacctgctattttgattcctataattttcaatcggttgcaacaattt
caaacgtacatgtcggatgaagttctgtcatgccattcgcaaacgttaaaaatgtggact
cagctatcgaatgcaaatgaaaaacttggtgctaaaagtcgtctgaaacgtgcatggaaa
tttggcaaatggatagatattgacgaatcaaatgaaaatgctgcaacaccatatcagaat
tacgcttctccagtgactgaagaccttgatcaacacaattcatctactgtatactctact
gaaatagaaaaagaaactgaaaaatgcaaatgtggcattatgcaaggtttaccaggacca
cccggaccaatgggagaagatggacaaaatggtaaggatggcatacctggagaagatggt
tctccaggcaaagctggcgccattcttcctcctaaaaagcgtgaaatctgccaactctgt
ttacctgggttaacaggacctcctggaagggcaggagtaaaaggaccgcctggtccaaaa
ggattacctggtcctcctggagtaaacggagttcccggagaaagaggaatggtaggtgct
gaaggtccaccaggatcagtgggagaatgtggtccgcctggactggctgggaagaatgga
aaagtcgttcaagtcatgggaccgccaggaaaacctggaactcctggagaacaaggtcct
aaaggtattccgggcaaacctggacgagatggtgcactgggaccgccaggtttggttggt
gatccgggagagccaggtccaccgggtcttcccggtaatcctggcgctattggaccacca
ggtgaaaaaggattaacaggcaaacctggaagctgtgatcactgtcctctacccagaatg
gcacctgaactgcaacaacagctactgaactgtactccctaa
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