Trichinella spiralis: Tsp_05200 Help Entry Tsp_05200         CDS       T01609                                  Name (RefSeq) putative DNA-repair protein   KO K10846   DNA excision repair protein ERCC-5 Organism tsp  Trichinella spiralis Pathway tsp03420   Nucleotide excision repair Brite KEGG Orthology (KO) [BR:tsp00001]  09120 Genetic Information Processing   09124 Replication and repair    03420 Nucleotide excision repair     Tsp_05200  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tsp03400]     Tsp_05200 DNA repair and recombination proteins [BR:tsp03400]  Eukaryotic type   SSBR (single strand breaks repair)    NER (nucleotide excision repair)     Other NER factors      Tsp_05200 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  XPG_N XPG_I DUF6879 Motif Other DBs NCBI-GeneID:  10908940 NCBI-ProteinID:  XP_003369790 LinkDB All DBs Position Unknown AA seq 859 aa AA seqDB search MIFKKVFSKGNILTKMTLNIVSTHNQAFSADEFLRCNICRKLYKIFSMHLVTITGLTVNI AVAHRSGQKTVNVMGVKGLWKILDAASKPVTLESLSGKILAVDLSIWLHQAVHVNFGSER HSIFEGPKAHLQILFFRLLKLLFYGIRPIIVFDGPEISILKKRTQIRRRIKLNESFTKSR KLQQKMLKVLAAKAADRFESTINENMTAHEASSALINAESTSSVQDIEKIERLQTSQDDH FDEDMWSYSNNEILLDGIDLKTVNELPLELQYEIYAAMKSQPSKLNVPSVSGAFSNYQIN ELLKRNEIDDKLAKLREEIILSDPLLTLNVHEAEKSTCAVKVKKLISRDNRHHIIFDREE KTVEDSKLTKPFENLENDIIPNCVTFDGNECEEMLFDDFIPGNDDVNYDENVKFIEERPC ELFANCKTLNDDLTNDSAGSSIVDVSSSIEASEPAFEKERYPSENEFTQQILSTAASDEL CDSEENKETFIECQSDDSDSFVEVEELSEEHLHDMLNETLKSEKIAENDFSDCVVLETKS VVANDVADIHWTGDFQKLESEHSRAEAGARTVTSQILDECEVFLRLFGVPIVKSLAEAEA QCAWLEQNQISEGTITDDSDIWLFGGQHVYRNLFVKKKLVQYFDMNTIKELSSLINCIAH PVFSALNREKFILLAMLVGCDYSQGVENLGVVTALEIIAEFNSAAEQSTPIETLVSFRQW FQSAPLPGESTFRTRLRKLCCHFPGTFPDQCVYDAFLNPKVNHFHAEDFKWNLPDLDAIR RYAEENFNWSKEKTDQHLLPVMKKLGRTHCENQSRISSHFLPITIDVKAKQSKRMKVLIN KMKRNETNDDVADSSDCVL NT seq 2580 nt NT seq  +upstreamnt  +downstreamnt atgattttcaaaaaagtatttagtaaaggaaatattttgaccaaaatgacattaaatatt gtgtccactcacaaccaggcattctcggctgatgaatttctgcgctgtaatatttgtaga aaattatataaaatcttcagcatgcatttagttaccataaccggcttaacagtaaatata gcagttgctcaccgttctggacagaaaacagtaaatgttatgggtgttaaagggttgtgg aaaattttggatgctgcctctaagccggtcactcttgaatctctttccgggaaaatatta gctgttgatttgtcgatatggttgcatcaggccgttcatgttaattttggttcagaacgg cattcgatttttgaagggccaaaagcacatcttcaaattttattttttcgtctgctgaag ctgttattttatggaattcgaccaataattgtttttgatggcccagaaatttctattttg aagaaacgtacacagatacgacggcggataaaattgaatgaatcatttaccaaaagtaga aagttgcagcaaaagatgctcaaggtattggctgccaaagctgctgatcgttttgaatct acaataaatgaaaatatgactgcgcatgaagcaagcagtgcattaattaatgcggaaagt acttcatccgttcaagatattgagaaaatcgaaagattgcagacttcacaggatgatcat tttgatgaagacatgtggagttatagtaataatgaaattctgttggacggaattgattta aaaactgtaaacgaattgccacttgaattgcagtatgaaatttatgcggcaatgaaatcc cagccgtctaaattaaatgtaccttcggtttcaggtgctttttctaattaccaaattaac gaattgctgaaacgaaacgaaattgatgataaattagctaaacttagggaggaaattata cttagcgatccgttgcttacgttaaacgtccatgaagcagaaaaatcaacatgcgccgta aaagtgaaaaaattgattagtcgagataatcggcatcatataatttttgatcgtgaagag aaaactgttgaagacagtaaactaactaaaccgtttgaaaatcttgaaaatgacattata cccaactgtgtaacatttgatggaaatgaatgtgaagaaatgctttttgatgattttatt ccaggaaatgatgatgtaaattatgatgagaatgtaaaatttattgaagaaagaccgtgt gaattatttgcaaactgtaaaacactgaatgatgatttaacaaacgacagcgcaggcagt tcaattgttgatgttagttcttctattgaagccagtgaacctgcgtttgaaaaggaaaga tatccgtctgaaaatgaatttacgcaacagattctatcaactgctgcaagtgatgaactt tgtgattcagaagaaaataaggaaacattcatagaatgtcagtctgatgatagtgacagt tttgtcgaagttgaggaattgtctgaagaacatctgcatgatatgttgaatgaaacttta aaatctgaaaaaatagctgaaaatgatttttccgactgcgttgttttggaaacgaaatct gttgttgcaaacgatgttgcggatattcactggactggtgattttcagaagttggaaagc gaacattcgcgagctgaagctggcgcgcgaacggttacttcacaaattttagacgaatgt gaggtttttttgcggctttttggcgtaccgatcgtgaagagtctagcagaagcagaagct cagtgtgcttggttagagcagaatcaaatttccgaaggtacgataactgatgattcggat atttggctatttggcggtcaacatgtatatcgtaatttatttgtcaagaaaaaattggtg caatattttgatatgaacactataaaagaattatcatcattaattaattgtattgcgcat cctgtgttttcagcactgaacagagaaaagtttattttactagctatgctagttggttgt gattattctcaaggtgtggaaaatctcggtgtagttacagcattagagataattgccgaa ttcaacagtgcagccgaacaaagtacaccaatagaaacactggtcagttttcgacagtgg tttcaatctgcacctttgccaggagagtcaacgttcagaacacgtctgcggaaattgtgt tgtcactttcctggcacatttccagatcagtgtgtatatgatgcttttttgaatccaaaa gttaatcattttcatgctgaagattttaaatggaatttgccggatttggatgctattcga cgatacgcggaagaaaattttaattggagtaaagaaaaaaccgatcaacatcttttgcca gtgatgaaaaaattaggaaggacgcattgtgaaaatcagagccgaatttccagtcacttt ttgcccatcactattgacgttaaagcaaaacagtcaaaaaggatgaaagttttaattaac aagatgaaaagaaatgaaacaaatgacgatgtcgccgatagttcagattgcgttttatga

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