Trichinella spiralis: Tsp_05213
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Entry
Tsp_05213 CDS
T01609
Name
(RefSeq) F-box/WD repeat-containing protein 1A
KO
K03362
F-box and WD-40 domain protein 1/11
Organism
tsp
Trichinella spiralis
Pathway
tsp04120
Ubiquitin mediated proteolysis
tsp04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Tsp_05213
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
Tsp_05213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_05213
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_05213
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
Tsp_05213
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
Tsp_05213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_C
WD40_Prp19
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_EML_2
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
F-box-like
Beta-prop_SPT8
Beta-prop_DCAF12
WDR90_beta-prop_4th
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
WD40_like
Beta-prop_IP5PC_F
Beta-prop_Nup120_160
Beta-prop_VPS8
F-box
KNTC1_N
Beta-prop_WDR11_2nd
DUF6188
Motif
Other DBs
NCBI-GeneID:
10908953
NCBI-ProteinID:
XP_003369803
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MGTSEQDSKGVRSMSVGNLPTETSEEKYQAPATALMLAGLSLNETQNTLSDIYLKQRDKI
VEPMFQRDFISLLAAKGLLNIAVKVLSYLDAKTLSIAEYVSRDWRRVIAQGHLWKKFIER
KVHSDSLWKGLAHKRGWIEHIVRTKPGGYSQLHCFYRKLYNQIIKDIEVAIFCLYRSVLQ
NTIESNWKHGRLLLYRINCRSDNSKGVYCLQYDDKKIVSGLRDNTIKGAVDPFFVHICTR
HKVMFTSSFSTIFDFKTLSCIKVLTGHTGSVLCLQYDDRVIISGSSDSTVRVWDVNTGHM
LCSLIHHCEAVLHLRFQNGMMVTCSKDRSIAVWDMVSPTVINLRRVLVGHRAAVNVVDFD
EKYIVSASGDRTIKVWSTDSCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRYYTFCR
LWDIESGICLRVLEGHEELVRCIRFDNKRIVSGAYDGKIKIWDLQAALNPCSSSTSLCLK
TLVEHTGRVFRLQFDEFQIVSSSHDDTILVWDFLNYKAQPTTATRAINQRNAQ
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgggtacttcagagcaggattcaaagggcgttcgatcaatgtcagttggaaacttgccc
actgaaacttctgaagaaaaatatcaggcacctgctactgcattgatgcttgctggctta
agtctcaacgaaactcaaaatacattgtccgatatttacctaaagcaaagagataaaatt
gttgagccaatgtttcaaagggattttatctctcttttagcagctaaaggtttgcttaac
atagctgtgaaggtgctttcgtatttggatgccaaaacgctctccattgctgaatatgta
agtcgcgattggaggcgcgtaattgcgcaaggtcatttgtggaagaagttcattgaacgt
aaagtacacagcgattcactttggaaaggtttggcccataagcgtggctggattgaacat
attgttaggacaaagccaggtggatattcacagttgcattgcttttaccgcaagctgtac
aatcaaattatcaaggatattgaagttgcaattttctgcttataccgttcagttctacag
aatactattgaaagcaactggaagcatggtcgtttgttgctttatcgaatcaattgtcgt
tcagataatagcaaaggtgtttactgtcttcagtatgatgacaaaaaaatagtctctggt
ctcagagataatactataaagggtgctgttgacccattttttgtgcacatttgtaccaga
cataaggtcatgttcaccagtagttttagtacaatattcgattttaaaacattgagttgt
ataaaagtactgactggtcacacgggatcggttctttgtttacagtatgacgatcgagtg
attattagtggctcgagtgattcaacagtgagagtatgggatgtcaacactggccatatg
ttatgctctcttattcatcactgcgaagctgtattacatttacgattccaaaatggaatg
atggtcacatgctcgaaagaccgaagcatagcagtttgggatatggtttctccaactgtt
ataaatttgcgtcgtgtcttggtaggccatcgagcggccgttaatgttgtggattttgac
gaaaaatacattgtttcagcatctggtgatcgaacaattaaagtatggagtactgattca
tgcgaatttgtgcgcacgttaaatggtcataaacgtggcattgcttgccttcaatatcgt
gatcgcctggtagtttcaggaagttctgataacactatcagatattatactttctgtaga
ctttgggatattgaaagtggtatttgtttgcgagttcttgaagggcacgaagaacttgtg
cgttgcattcgttttgacaacaagcgcattgtatctggggcttatgatggtaaaataaaa
atatgggatctccaagcagctctgaatccttgttcctcgtctacttcgttgtgcttgaaa
acactagtggaacacacaggtcgagtgtttcgcttgcagttcgatgaatttcaaattgta
agcagctcacatgacgatacaatattggtttgggattttttgaattacaaagcacaacct
acgacagcaacacgcgcaataaaccagcgtaacgctcaatga
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