Trichinella spiralis: Tsp_05230
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Entry
Tsp_05230 CDS
T01609
Name
(RefSeq) protein pad-1
KO
K26680
protein dopey
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_05230
Membrane trafficking [BR:
tsp04131
]
Endosome - Golgi transport
Others
Others
Tsp_05230
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dopey_N
TPR_DOP1
Ist1
DOP1_C
Motif
Other DBs
NCBI-GeneID:
10913023
NCBI-ProteinID:
XP_003371558
LinkDB
All DBs
Position
Unknown
AA seq
2137 aa
AA seq
DB search
MFTVGPNYTKLKTNLRLAMNRLKLLGKKKSEMGQKARKEIADFITQNKADRARIRVEQII
LEDYSIEAFEFVEILCDLLLTRFDFIQQMKTLDSGLEEAVNSLLWASPRLMTEVPELKVI
SDQLAIKYGRQFVNGCRENKFAKVNCKLLQKLSIHTPSPSYMIEIAKSHQVPYTPDERYM
KEESDVSAAEGSLIDLDTDFNKTQKPKQELGWIFPPSYFENPGQVQTNSAAQHPLYPEVL
EPKVDAYLENDNSDEDKRFVKDLRSLHFETTTEVVLPSAPLLPTAPESIMDLPEKVRHSL
VQHVSTCKNIMYVSHHELTRTWILLEFLRHLPMTMLPESRMKAEADILSSSPEYKAFEIA
VEKSLKNFETSVQWVDRIVALDKLNRLLTANSKFGVVPRDVQISKQLSYCFHPSLPVGVH
IKALECYEIIFDLLGESDLANSLHLYASSLFPLFLNASIQVKRELLKIFEKHFIPLGVKL
LPALCGFLNSVLPVVEEGSEFFDQCLNMLNAVCDKVGPGEFFTRLWYCVITTPSTRLSAL
LFRRLLDFVLAAFPLHTDCLLREDVFRLVQKCIFVMLRNDLSLNRRLFHWLCGSRSKHTD
LSYFKKHAKDVVLKSLDSLLEAADVSWAQCIRTIHLLLCLFEKPLLSKEITDHVLLSCLL
AVERFSTSPSENQWTNCDGKDLFFQQLDVLLSKLPNDYIWNHMITIINRRETNESLLVRI
CRLMIILHNCTDVVIHATLNMNMRVKLLERLISIIFDETDLHNETVETILKTAVGLSENL
KNKLGIIVDEIISADTVKHFSNFFNVVNALLRQLYANLKMPSSRKVLFSVCELIMHVLEF
PLPSCDISDHMDVHLLVEQIVTMSLGSDMKIGFYCAQMILYFINVQRMDDASAEQSLNGE
IPTLMLLFGKTLFAHTNVDNYADVFIDVHSIMYTSWNAIEFNQQHALAAGRVFVYISSLF
SQKCESFILKNLSSEDLVICLKLADPASARFSVQQLNLAKVEGKEHLYELQLVESPQHKL
YHLCMDNEAKWTVDLQKLILFKQSDNNSSACANVDGQLFDDGADDGDLNARLSERLTESV
IYGNSMSLLPADKTARPDDVKPISPHPTAADQAPAGSFWYHPLHAHLLLYRHWYDPEPLL
HAYNCLALVLRYSPANFAKTLLSTPVFAANSGRTYFPNVHTRLTHCMKFHRLSISGRVDS
KIEDGSDDDRLTYCVLYMDLLLTFSTYILRSVFINNPTTSGQRLRIQHLGRRVKIACLRF
LTECFVAVDQLAAENGSSLLLHLADVLDRCKVQKCILHLLMATVFDVQNTTESSNARRTF
SEAIVQFNFCTGSTMVDSFSVYQHWLLRFVQSFLRIEHTVSKIWMDERSSDQLQANGGLS
VVEQRLILAKKRLFASTILKALQAGCEFHEIWLRFVVDSVPFLGSVGPLVIVNSVEQALC
NVESAYCRSTGTARLPPLFPQAGALSASDSVYPENYVHTVFDLLILLLHSSLLDSFAENY
RVNAVEPAVSKSLCPVPAGGTAETKPGILQNLFKAFTFNDTSPLDNADSDNSFVQSVVFQ
RWQILSAFPNILFLMSRLWSMAKRRMPTTAASVRSSEVNSLHLAFNLFYTIVCFLFLACF
EFNCGISQSSRTQLSNSPAFFICTGTYPVGNSVAGNGSLHRANGSSVRLESCLDVGLRPV
TSVLADDHAWAVEIPPFQDVALKLVGMLNEMISQQLEQPYWLKRTFVVKIHEEESVKTEP
SSSRASSSGSCPNLDNISPVGEEECLSKRKKFIYCQKAIALLSKRLMIIVNYLYKKEDAE
RLLHLFNSVWVNLLPFLKAKNVAGNRINFENATGLLVQLSEHSELFSAWRKTAFEIFIDP
SFFKMSISCLKKWTIVIERLRILSKDIVSRVFAPQSLFLSKEQEYELRAAALRRLSFLLL
STAVDQYDDVLTEIQDRITENLRLSHVPHIHKAIFICFRALVIRLSSKNLPHFWYIIINE
IVQVLKRLENHIEVGNSSAEDYRCAREDQWLQLYLHANKLLCTLMLYSSTHLPEFQIPHF
SDVGTDQFWPFVKRIAFLLRTKLGVTESTTITVNTEKAAGNCLINFLNKRQLSSLTDLSE
LYFTLCNVASETSRRPIHAQDVIEKIELSIYSDLAEM
NT seq
6414 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtcggcccaaattacacaaaattgaagactaatctgcgtctggcgatgaat
cggttgaagctgttgggcaaaaagaaatctgagatggggcaaaaggctagaaaagagatt
gctgattttattacacagaacaaagcagatcgagctcgaatccgtgtcgaacagattatt
ctcgaagattacagcattgaagctttcgaatttgttgaaatattgtgcgatcttctgttg
actagatttgatttcattcaacaaatgaagactctggacagtggcttggaagaagctgtg
aacagtttgctctgggccagtcctcgtttgatgactgaagttcctgaactgaaagttata
tccgaccaactggctataaaatatggaaggcagtttgtgaacggttgtcgagaaaacaaa
tttgccaaagtgaattgtaaacttttgcaaaagctaagcattcatacaccatcgccatca
tacatgattgaaatagcaaaaagtcatcaagtaccatacactccagatgaacgatatatg
aaagaggaaagcgacgtttcagcagctgaaggatcgttgattgatttggatactgatttc
aacaaaactcagaagccaaagcaagaattgggttggatttttccgccatcatattttgaa
aatcctggccaagtacaaacaaattcggcagcacagcatccgctttatcctgaagtattg
gagccgaaggtggatgcatatttggaaaatgataattcagatgaggataaacgttttgtg
aaggatttacgttctcttcattttgaaacaaccactgaagtggttcttccaagcgctccg
cttcttccaacggccccagaaagcatcatggatttgcctgaaaaggtacgccattcatta
gttcagcatgtatcaacatgtaaaaacatcatgtatgtgagtcatcacgaactgactcgt
acttggattctgttagaatttcttcgacatttgccgatgacaatgctacccgaaagcaga
atgaaagcagaagcggatattttatcatctagtccggaatacaaggcatttgaaattgca
gtggagaagtcgttgaaaaactttgaaacatccgtgcaatgggtggataggatcgtagct
ttagataaacttaatagactgttgaccgccaattctaaatttggcgttgttcctcgagat
gtacaaatttcaaagcagctgtcttactgctttcacccgtcattacctgtaggtgttcat
attaaagctttggaatgttatgaaataatattcgatctgttgggtgaatcggatctggcg
aacagtttacatttatatgcatctagtttatttccactgtttttgaacgcctccatccag
gtgaagagggaattgctgaaaatttttgaaaagcatttcattcctttgggcgttaaactt
ctgccagccttgtgcggctttctgaacagcgtactgccagtagtggaagagggttctgaa
tttttcgaccaatgtttgaatatgttgaacgccgtctgtgacaaagttggtccaggagaa
tttttcactcgtctttggtattgcgttattacaactccgtcgactcgtctttccgctctg
ttgtttcgtcggctgttggattttgttttggcagcttttccattgcacacagattgttta
ttgcgtgaagatgttttccgtctcgttcaaaagtgtatttttgtaatgcttcgcaatgat
ctttccttgaaccgtcgtctgttccactggctgtgcggttcacgcagcaaacataccgac
ttgtcttatttcaaaaaacacgccaaggatgtagtgctgaagtcattggacagtttgttg
gaagctgcagatgttagctgggcccagtgtattcgtacgatccaccttttgttatgcctg
tttgagaagccactgctgagcaaggaaattaccgatcatgtacttttgtcgtgcttgctc
gcggtcgaacgattttccacttctccgagtgaaaatcagtggacaaactgtgatgggaag
gatctgttttttcagcaactcgacgttttattatctaaattgccaaacgattacatttgg
aatcacatgatcaccatcattaatcgacgtgaaacaaatgaatcgctactggtgcgaatt
tgtcgcctgatgatcattttgcacaactgtaccgatgtggtcatacatgcaacattgaat
atgaacatgcgagtgaaattattggaaagattaatttcaataatttttgatgaaactgat
ttgcacaacgaaactgtggaaactattctcaaaacagctgttggtttgtcggaaaatttg
aaaaataaactggggatcattgttgacgaaataatatccgcggacactgttaaacatttt
agtaattttttcaatgttgtcaatgcgctcctacgtcaactgtatgccaatttgaagatg
ccaagctcgagaaaagtgttattttccgtctgtgaattgataatgcacgtgttagagttt
ccgttaccgtcatgcgacatcagtgatcatatggatgtccacttgttggtggaacaaatt
gttacaatgtcgttgggttcggatatgaagattggattttattgtgctcagatgattttg
tatttcatcaacgtgcaacgaatggacgacgcatctgctgaacaatcattgaacggagaa
atacctactttgatgctgttgttcggcaaaacacttttcgctcataccaacgttgacaat
tatgcggatgtatttatagatgtgcatagcatcatgtacaccagttggaatgcaattgaa
ttcaatcaacagcatgcattagccgctggacgagtgtttgtttatataagttcactgttt
tctcaaaaatgtgaaagcttcattttgaaaaatctctcctctgaagacctggtgatttgc
ttgaaattggccgacccggcgtcggctcgattttcggtgcagcagttgaatttggccaag
gtcgaaggaaaagagcatttgtacgagttgcagttggtggaatcaccgcagcataagctt
taccacttgtgcatggacaacgaagccaaatggaccgtagatttgcaaaagttgattctg
ttcaagcaatcagacaataattcgagtgcttgtgcaaatgtggacggtcagttgttcgac
gacggtgcagatgatggtgatttgaatgcacggttgtccgaacgactgactgaaagcgtg
atatacggaaacagcatgtctttgttgccagcggacaagacggcccggccggatgacgtg
aaaccgatttccccgcatccgactgctgccgatcaagctccggctggcagtttctggtac
catccgttgcatgcgcatttgttgctttaccgtcattggtacgatcctgaaccgcttctg
cacgcttacaattgtttggcgctggtgttgcgctattcgccggccaatttcgccaagacg
ttgctcagcacgcctgtttttgccgccaactctggccgcacgtattttccgaatgtgcac
acgcgtttgactcactgtatgaagtttcaccgtttgtccatatctggcagggtggattcg
aaaattgaggatggttcggacgacgaccggctcacgtattgcgtgctctacatggatttg
ttgctgacgttttccacgtacattttgagaagcgtctttatcaacaacccaaccacgtcg
gggcagcgtttgcgtattcaacatctgggcagaagggtgaaaatcgcttgcctgcgcttc
ttgaccgaatgctttgtggccgttgaccagctggcagctgagaatggttcgtcgttgctg
ctgcatctggccgacgtgctcgaccgttgcaaagtgcaaaagtgcattttgcacttgctg
atggcgaccgtgttcgacgttcaaaatacaactgaatcgtcaaacgccagacgaacattc
tccgaagcaattgtccaattcaatttttgtaccggttccacgatggtcgactcgttctct
gtctaccagcactggttgcttcggtttgtgcagtcgtttttgcgaatcgagcacaccgtg
agcaagatctggatggacgaacgttcttcggatcagctgcaagccaatggcggcctgagt
gtcgtcgagcagaggttgatactggccaagaagcgtctgttcgcgagtacgatactcaaa
gctctgcaagccggttgcgaatttcacgaaatttggctccgcttcgtggtcgacagcgtg
ccgttcctcggctcggtggggccgttggtcatagtgaacagcgtcgaacaggcgctttgc
aatgtcgaatcggcttattgtcgttcaaccggcaccgcccggctgccccctctgtttccc
caggccggcgccctgtcggcttcggactcagtgtatcctgaaaattacgtgcacacggtg
ttcgacttgctcattttgctcttgcactcgtccttgttggactcgtttgcggaaaattac
agagtcaacgcggtcgagccggccgtgtcgaaaagcctctgccccgtcccggccggcggc
actgccgaaaccaagcctgggattttgcaaaatttgttcaaagcgttcactttcaacgac
acctctccgctggacaacgcagattcggataacagtttcgtgcaatccgttgtctttcaa
cgttggcaaattttgtcagcttttccaaatatattgttcttgatgagcagattgtggagc
atggccaagagaagaatgccgacaacagctgcatcagtgcgatcctcagaggtcaattct
ttgcatttggcttttaatttattttacactattgtttgctttttgtttttagcttgtttt
gagttcaattgtggaatttctcagtcctctcgtactcaactttccaactcacctgctttc
ttcatttgcactggaacgtatcccgttggaaattctgttgctggaaatggttcactgcac
cgtgcaaacggctcctctgtgcgacttgaaagctgcttggacgtcggtttgcgacctgtt
acttcagtgcttgcagatgatcacgcatgggcggtcgaaattcctccttttcaagatgtt
gctttgaaattggtcggcatgttgaacgagatgattagccaacagcttgaacagccgtac
tggttgaagaggactttcgtggtgaagattcatgaagaggaaagtgtaaaaactgaaccg
tcgtcgagcagagcttcttcttctggcagttgtccgaatttggacaacatcagccctgtc
ggcgaagaggagtgcctctccaagaggaaaaaattcatctactgtcaaaaagcaatcgct
ctcctttccaagcgtctgatgatcatcgtcaactatttgtacaagaaggaagacgccgaa
cgtttgctgcacttgttcaacagcgtttgggtgaatttgttgccatttttgaaagcgaaa
aatgtggccggcaataggatcaattttgaaaacgccaccggccttctcgttcagctgagt
gaacattcggaattgttttcagcttggcgaaaaaccgccttcgaaatattcatcgacccg
tcctttttcaaaatgtccatctcttgcttgaaaaagtggacgattgtgattgaacgcttg
cgaatactgtccaaagatatcgtcagtcgtgtttttgcaccacagagtttgtttctttcc
aaagagcaagaatatgaattacgcgcagcagctttacgtcgactgtcatttttgctgctc
agtaccgccgttgatcagtacgatgatgttttgactgaaattcaagaccgcatcacggaa
aatttacgcttgtcccacgtgccgcacattcacaaggcaatattcatctgctttcgcgct
ttggtgattcgtttgtcgtcgaaaaatttgcctcacttttggtacattattataaacgaa
attgtgcaagtgttgaaacgtttggaaaatcacatcgaagttggcaattcgtctgccgaa
gattaccggtgtgccagagaggaccaatggttgcagttgtacttgcacgcgaataagctt
ttgtgcactttgatgctgtattcttcaacccatttgcccgaatttcaaatcccccacttc
agtgacgtaggtacggatcaattttggccatttgtgaaaagaattgcattcttgctgcgc
accaagctaggtgttacggaatcgaccactattaccgttaacacagaaaaagcggcggga
aattgtttgatcaactttttaaataaacgccagctttcctctttgactgatttgtcagaa
ctttacttcaccttgtgcaacgttgccagtgaaactagccgacgtccaatccacgcgcag
gatgtcatcgagaaaatcgaattgtccatttacagtgacttggcagaaatgtga
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integrated database retrieval system
