Trichinella spiralis: Tsp_05300
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Entry
Tsp_05300 CDS
T01609
Name
(RefSeq) vacuolar proton pump subunit D 1
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
vATP-synt_AC39
DEAD
Helicase_C
ResIII
UvrD-helicase
AAA_30
CMS1
AAA_19
Motif
Other DBs
NCBI-GeneID:
10913091
NCBI-ProteinID:
XP_003371626
LinkDB
All DBs
Position
Unknown
AA seq
794 aa
AA seq
DB search
MVALDELTFNIDHGYLEGLVRGFRGGILSPSDYTNLVQCDTLEDLKLHLQSTDYGQFLAN
EPGPITVNVIEEKLKEKVVAEFQHFRNNSLVPLSTFLDYISYSYMIDNIVLLITGTLHQR
PIAELISKCHPLGSFEQMEAIHIASTPAELYNAVLVDTPLAPYFVDCISEQDLDEMNFEA
DRRAIIITINSFDTELSKDDREKLYPKCGKLYPDGLAHLARADEYDQVRQICECYMVKLN
VKAFMQQFHFGVFYSYLKLKEQEMRNIIWIAECIAQRHRAKIDNYIPIVPSDCQASIADE
STLDTVNKSKLSQTTFSELGVREPFLKGLTRMKFFAPSPIQAKAIPVGFAGHDMIVQSKS
GTGKTCVFSILAVHMVRKEADSGVQVIIVTPTCEIAIQIQHVIDQIAHFDEHLKCQFFSG
KFRSLLLDKDELKRCQIVVGTPGRLCHLVKLNAISVERVRMLVFDEADRLMNGTFQPTLN
VLFNHLSASKQVVVTSATYPHAFCEMLKRYMRNPTFISISDDFESTNFLFTCFVDYCHFL
AYFNFFPSSFPDIKHFAMIAVCNVKNTTNNFELKIEAVQWLFSHFSFNQAVVFYNNNELL
MTIAQELDSRLWSVRYISRDIEPQERLKVIEQMRSIESRILVSSDLLSRGVDLPMLNMVV
NLDVPKYGTDYLHRAGRAGRFGRSGLSFTVITNECEAVKFFHLMKGLNVRFKLLPSDAAM
DLVDNSSYFDSLKYVEFSPLKIWNRFMKCTIRLPERKDRVKHDPNWKQDIYDKKDVPKKR
RARGKVQKQQSSVQ
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atggttgccctagatgaactgacatttaatattgatcacggttaccttgaaggtttggtg
agaggtttcagaggtggtattttgtctccaagtgactacacaaatttagtacagtgtgat
acactggaagatttgaaattacatctgcaatcaaccgattatggacagtttttggcaaat
gaacctgggcccataactgtgaatgtaatcgaagaaaaattgaaagaaaaagtggttgct
gaatttcagcattttcgtaacaacagtttggttcccttatcaacgtttcttgattacatt
tcgtattcgtatatgattgataacatagtgttgttgatcactggcactcttcatcagcga
cctattgccgaattgatttcaaaatgccatcctctgggatcgtttgaacaaatggaagct
attcacattgcatcaactcctgccgaactttacaatgccgttctcgttgacactccgctt
gcaccttattttgtggattgcatctcagagcaagatttggacgagatgaacttcgaagcg
gatcgtcgagcgatcattattacgataaattcgtttgatacggaattgtcgaaagatgat
cgtgaaaagttgtatccgaaatgtggcaaactttatccagacggactggcgcatttggct
cgtgctgatgaatatgatcaagttagacaaatttgtgaatgttacatggtgaagctgaat
gtgaaagcgttcatgcagcagtttcattttggtgtattttattcatatttgaaattgaaa
gaacaagaaatgcgcaatattatttggattgccgaatgcattgcgcaacgtcatcgcgcc
aaaatcgataattacataccgattgtgccgtcggattgccaagcgagcatcgcagatgaa
agtactttggatactgtgaataaaagcaaattgtcgcagaccactttcagtgagttgggt
gttcgtgagccgtttttgaaaggactaactcgaatgaagttctttgctccatcaccaatt
caagcgaaagcaattcctgttggttttgctggtcatgatatgattgtgcaatcgaaatca
ggcactggtaaaacttgcgtgttttccattttggctgttcatatggttcgtaaagaagcg
gacagtggtgtccaagttatcattgtcactcctacttgtgaaattgccattcaaattcaa
cacgttattgaccaaattgcgcactttgacgaacacttgaagtgtcaatttttttctggc
aaatttcgaagcctgcttttggataaagatgaactgaagagatgtcaaattgtggttggc
acaccgggtcgattatgccatttggtgaagctcaatgctatcagtgtggaaagagtacgg
atgctggtgttcgatgaagccgatcggctgatgaatggcacttttcagccaacactgaac
gtacttttcaatcatctttctgcaagcaagcaagtagtggtgacgtcggccacatacccg
cacgctttttgtgaaatgttgaagcgttacatgcgaaatccaactttcatcagtatcagt
gatgatttcgaaagtactaattttcttttcacgtgttttgtcgattattgtcattttttg
gcatattttaattttttcccctcttccttcccagatatcaaacattttgcaatgattgcc
gtctgcaacgtgaagaacacgacgaacaattttgaattgaagatcgaagctgtgcaatgg
ctattttctcacttcagcttcaatcaagcggttgttttttataataacaatgaactcttg
atgaccattgctcaggagctcgattcacgtctttggtcagttaggtacatttcgcgcgat
attgaacctcaagaacgactgaaagtgatcgaacagatgagaagtatcgaaagtcgaatt
ttagtgtccagtgatttgttgtcgcgtggggtggatttgccaatgttgaacatggtggtg
aaccttgatgttccgaaatacggtactgattatttgcatcgcgctggacgtgctggacgt
tttggtagaagtggactgtcgtttactgtaattacgaatgaatgtgaagcagtgaaattt
tttcatctgatgaaaggtttgaatgttcgcttcaaattgcttccttccgacgctgcgatg
gatcttgtggacaattcgtcctatttcgattctctgaaatatgtagaattttctccattg
aaaatttggaaccgtttcatgaagtgcacgattcgacttcctgaaaggaaggatcgtgtc
aagcacgacccaaactggaagcaagatatttatgataagaaggatgttccaaagaagcgc
agagctcgtggcaaggtgcaaaagcagcaatcatcagtacaatga
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