Trichinella spiralis: Tsp_05384
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Entry
Tsp_05384 CDS
T01609
Name
(RefSeq) putative Rho GTPase-activating protein syd-1
KO
K20655
Rho GTPase-activating protein SYDE
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_05384
Membrane trafficking [BR:
tsp04131
]
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
Tsp_05384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
PDZ
Wbp11
PDZ_6
C2
Motif
Other DBs
NCBI-GeneID:
10913170
NCBI-ProteinID:
XP_003371705
LinkDB
All DBs
Position
Unknown
AA seq
1195 aa
AA seq
DB search
MPWDSFRCKPRSSRSKDEASSAAGCFSKATLESRQRNLPKEIYQKIKEVDQQASTLTSSA
SQGLSARILDRYDYVQQLPDGREKVSTCQTLELIKKPAQTLGIYLREGNGIDRADGVFVS
RLMEGCDVEKAGYLAAGDEIISVNDVNVTRMSIDDVVVMISIPRRLILRTRSDKRNPCCP
TGESLPTKAVDKPVAILKQIPRDDSKESVMTDEGKPLASSQPLTTAQTSLGTRARMQNLE
IDDSQKANLGMRQPPPVMRQSFSGKVCLVPESSCTKVNPPVQDQGPSRSLSDRWSYGRQL
AMHSPRLLDSEGRLMRTENLQLSNPKTQNAKPVNAAGDGSLYKTAYIMPPKLQNTALSSN
DPNLVKRERYSLGAFDSASTSYSHCFVPSNLPDAANTATNRMLYSPRNVASDTESYCNDP
ASRFTSAGVMSNRPTYSKNYKSPICQESTSDVFKSNSLPRRQNRRTIRWSNDVATKAGER
LPVQGNYDVSDSDGVVSAPEIPLSPVRYPVHWEQPGQRHSAKTIDEVFSRAEYQSWLQCF
DKKLSSSPLKSGDSFQTKPAYCGIDSELRKGSKNRSSSVPPRGLLAAGSYVRGVHPPNYE
TSPQSRRFPVDISPLPQRRYPLQLASSNVGTMLFNASPTASDCPSPFTGLLVIQIFEGRS
LRVSNDMEELYCVIEVDCEHRARTEVKNQAMKFQWRESFEIDVWESKIIDLYIYSWHPQF
RHKLRHRGSLQLLDSFLLSSLMDSKAQSFALNLEPRGQLFIRLGFLSMLLMYRRQLALRP
SAYWGIPLSILVEREATDYEVPILLVNLLQEIERRGLNSMGLYVLSGSVEKKMAIINEIE
NNPLNVDLSPEFVPDINVLTSIFKDWLCALPEALVASSTYQTLIDAWRVCLPNDKEGNFR
LIFGVLDCLPNVNKLFSFLTVTENKLSVYISVGTSTKAKSHTVNLLDHRLAARIMGTVLD
LWPSKMNNSDSNESENSVINLSTKGPVSLMNICWKGNQIPESNSDQARKIARKRELKKNK
KQRWMVRQSVLRSKDPQEIIKSLEALDAVELNYENPTTLNERVLQDKRTKLLAAKIAAEM
DPSEIPLPESEPLFNEGFRGYDFQNIPTSSVTKMNVRLRGPGIPPQPPPHYDAYRNLTLT
IPLIDEELQLPPFIVDESDEDETPAVDESAVTKEAGDKVGDAAYEEFLKELKQLL
NT seq
3588 nt
NT seq
+upstream
nt +downstream
nt
atgccttgggattcgtttcgttgtaagccgcgttcgtcgcgaagcaaagacgaagccagc
tcggctgccggctgcttttcaaaagccacactcgaatcacgtcaacgcaacttgcccaaa
gagatttaccaaaaaatcaaagaagtagaccaacaagcgtctaccttgacatcatctgct
tctcaagggttgtcggccagaattttggatcggtatgattatgttcagcagcttccagat
ggaagagaaaaggtctcaacttgccagacattagaacttataaaaaagccagcccaaacg
cttggcatatatttgcgtgaaggaaatggtattgaccgtgctgatggagtgttcgtctcg
agacttatggaaggctgtgacgtagaaaaggcaggttatttggctgcaggagatgaaata
atatctgtaaatgatgtaaatgtgacgagaatgagcattgacgatgttgtggtcatgatt
tccattccgcggaggttgattcttagaacaagaagtgacaaaagaaatccctgttgtcca
accggcgagtctttgccgacaaaagctgtcgataaacctgtggctatattgaaacaaatt
cctagagatgatagcaaagaaagcgtgatgacagacgaaggaaagccgttggcctcgtct
cagccactgacgaccgcacaaacgtcgcttggaactagagcgagaatgcaaaatttggaa
attgacgattctcagaaagcaaatctgggcatgagacagcctccaccggttatgaggcaa
agcttttctggtaaagtttgtttggtgccggaatccagctgtacaaaagtcaatccgcct
gtgcaggatcagggtccaagtagatcgctttcggatcggtggagctatggccgtcagctt
gctatgcacagtccacgtttgttggatagcgaagggagattgatgcggacggaaaatttg
caactgtcgaatccgaagactcaaaatgcgaagccagtaaatgctgctggcgatggttcg
ttgtacaaaacagcatacataatgccgccaaaattgcaaaatactgcattgtcatcaaat
gatcctaacttagtcaaacgggaacgatattctttaggagcttttgactcggcttccact
tcttatagtcattgttttgtgccttcgaatttgcctgatgctgcaaacactgccacaaat
agaatgctgtacagtcctagaaatgttgcttctgatactgaatcatactgtaatgatcca
gctagcaggttcacgtcagccggtgtcatgtcaaatcgaccaacgtacagtaaaaattat
aaatctccaatttgtcaagaaagcacgagcgatgtattcaaatccaattccttgccacgt
cgtcaaaaccgccgtactatacgatggtcgaatgatgttgccacgaaagcaggagaacga
cttccggtgcagggaaattatgatgtttctgattcggatggagtagtatctgctcctgaa
atacctctttcccctgtacgctatcccgttcactgggaacagcctggtcagcgacattcg
gcaaaaacaattgacgaagtattttccagggccgaatatcaatcatggttgcaatgtttc
gacaaaaaactgtcttcctcaccattgaaaagtggagactcttttcagacgaagcccgca
tactgtggcattgatagtgaactgagaaaaggctcaaaaaaccgttcatccagtgtgccg
ccaagaggtcttttagctgcaggaagttatgtacgcggagtgcatccgccaaattacgaa
acttcaccgcaaagtcgtcgttttccggtcgacatttctccactgccccagagacgatat
ccattgcagcttgcatcttccaacgtcggtacgatgctattcaacgcgtcaccgacggct
agcgattgtccatctccatttaccggtttgttggtgatacaaatttttgaagggcgttcc
cttcgggtcagcaacgatatggaagagctttactgtgtaattgaagtcgactgtgagcat
cgtgctaggacagaagtgaaaaatcaagcaatgaaatttcaatggcgtgaatcttttgaa
attgacgtttgggaaagcaaaataattgacctttatatttattcttggcatccacaattt
cgtcacaaactgaggcatcgcggttcattgcagctgctcgattcatttcttttatctagt
cttatggatagcaaggctcaaagttttgctctgaatttggaaccacgaggtcaactgttt
attcgactaggatttctcagcatgttgctgatgtacagacggcaactggcactaaggcca
tctgcatactggggaatccccttatccatcttggtagaaagagaagcgacggattatgaa
gtgcctattctgcttgttaatttgctacaagaaattgaacgacgtggtcttaattcaatg
ggcttatacgttttgagtggttcagtggagaaaaagatggcaataattaacgaaattgaa
aataatcctctaaatgtcgacttgagtccagaattcgttcctgacattaatgttcttaca
agcattttcaaggactggctttgtgcattgcctgaagcgcttgtggcgagcagtacatac
caaacgcttattgatgcttggcgtgtctgtttaccgaatgataaagagggaaattttcgg
cttatatttggtgtacttgactgccttccaaatgttaataagttattcagttttttaacg
gtgactgaaaataagctctctgtatatatcagtgttgggacgtcgacaaaagcgaaatcc
catacggtgaaccttttagatcatagattagcagctcgaataatgggaactgtactcgat
ctctggccatcaaaaatgaacaattcggacagcaacgaatcagaaaacagtgtcatcaat
ttatctaccaaaggtcctgtctcactgatgaacatttgctggaagggaaatcaaattcca
gaatccaactctgatcaggctcggaaaatagcacgaaagagggaactaaagaaaaacaaa
aagcagcgatggatggtacggcaaagtgttttgcgcagtaaagatccacaagaaataatc
aaaagtttagaagctttggacgctgttgaactaaattatgaaaatccaaccactctcaat
gaacgggttttgcaagacaagcgaaccaaactactggcggcaaagattgccgctgaaatg
gatccatcggaaattccgcttccggaaagtgagccattgtttaatgaaggattcagagga
tatgattttcagaatattccgacttcttctgtaaccaaaatgaatgttcggctgcgaggt
ccaggtataccacctcaacctcctccccattatgacgcatatcgtaatctaactttaacg
atacctctgattgatgaagaactgcagttgccaccctttattgtcgacgaatctgatgaa
gatgaaacacctgcagtggatgaatctgcagtgacaaaggaggcaggcgataaagtagga
gatgccgcatatgaagaatttttgaaagagttgaaacagctgttgtga
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