Trichinella spiralis: Tsp_05506
Help
Entry
Tsp_05506 CDS
T01609
Name
(RefSeq) zinc finger protein
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH
zf-H2C2_2
PH_11
zf-C2H2
zf-C2H2_4
Motif
Other DBs
NCBI-GeneID:
10913317
NCBI-ProteinID:
XP_003371852
LinkDB
All DBs
Position
Unknown
AA seq
1202 aa
AA seq
DB search
MDERVEGYLSKWTNFLSVRSRLSFLNSFLKEIAFNIGWQSRWFVLEDGVLYYYKSKEEVQ
AGCKGSVNVAMCEIIADQVYPNRMEVWIPGEKHFYLQCSSAQERQRWLMALGSAKAKYNS
TAAMNNTFNGILFIFLVTVLMCKCFVDSIMKNALNAKSKELKLFCSILRHHLDAMLKSLD
KNESISPQQFIKEAKKIYKTCMRCSGITEDWLFVMNRCNLALSLNENDWKNDDDEDNNND
LVDDELSHQDTQSVRSCSSSDSSSESSDNGSTAELLLESPPKIIADMLLNLAECLNVENP
TTMKNFQTATETLITILDAFNFGAMAGIKMDLLRTIERTALFCDENMSSLKQVLEAEAKL
VVGANLFEHLIGYFKTCALFLLKCFRNLCSESTNSLQCLKKAFRDTFTAPHFKLINYVIE
TTTPHVASADEIALALCNEEDKPILEDNVDNSLLLRFFTHFPFLNSASMLHAGHCSFAHC
LTAVPVVCKYFFYQFHCKVKCRLLSFVFTSSILQTNVLFGLVYLGRSSCCSCRFLLIFDN
WLFFRSSDWSMLVGNAKCAESVGQITVDGQEAIFIPITLPSSVGSLLLPPSQTFTADLAE
LMQPGLQIATTVPNAGESLVPVKSSSDSGTGSLSAVSLFHGQSYPVADGNETSRSSVVHL
QAMCPSPGRAVEDGWSSSKVGSSVGCPTGLTDTTGRKSSTRSLVPILPKPPPLASCQPKQ
IQPTVIVHQPQTIVLPVGEVGSTRTDAAVDPSQTPLWLSFETSADQLTNVAGVGQGQLTA
VNLPEEAVNVGAPSLFTVQPMDSGKSLYQPSKSDCPSASPVLIQLATSSFACPSVSGGGG
GGVGSSSLAYDQPRIDNKADNVPQPPGHNEPTASASNVAAVADYSSSLESSQQSQQQYWL
IQSGTAGAGGQLISMQPANGSSTLVTTASAPSGDQQQQEHSTKLPVQPIVIPHGQLAATS
GNVGHSQLVSPRALLVGNSHFQQDPNDPSKWTMIPVNVGSNGKAPVASLSGATALLAVSP
TPTLMDLSLFTAAPNNSASVNKQSSVQSETAATASATSKRLKRIACSCPICKLNETKPTS
ERLKYHVCHIANCGRTYGKTSHLRAHLRWHMGERPFSCDWPLCEKRFTRSDELQRHHRTH
TGEKRFLCCICQKRFLRSDHLTKHKKTHCQAGNKDATVETSSHDSDKTNNALEVDCSNSS
AG
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atggacgaacgagttgaaggttatctgtcaaagtggaccaactttttaagtgtgcgcagt
aggttgagctttttgaacagttttttaaaagaaattgcttttaatataggctggcagtcg
agatggtttgttcttgaagatggtgttttatattattacaaatcaaaggaagaagttcaa
gccggttgcaaaggttctgtgaatgtggcaatgtgcgaaattattgccgaccaggtgtac
cctaatcgtatggaggtgtggattcccggtgaaaagcatttctacttgcagtgttcaagt
gcacaagaaagacagcgttggctgatggctttaggatcagctaaagcgaaatacaattcc
acggcagcaatgaacaacacgttcaatggtatcttatttatttttttagtaacagtgcta
atgtgtaaatgttttgtagatagtatcatgaagaatgctttgaatgcgaaatcgaaagaa
ttgaaattgttctgcagtattttgagacatcatttggatgcaatgctgaagtcgttggat
aaaaacgaaagcatctctccacaacagttcataaaagaagcaaagaaaatttacaagacg
tgtatgagatgttcgggtattactgaagattggttgtttgttatgaatcgctgtaattta
gcgttgtctttgaatgaaaatgattggaaaaatgatgacgatgaagataataacaatgat
ctggtcgacgatgagctcagtcatcaggatactcagagcgtacgaagttgtagttcaagt
gattcgtcaagtgaaagttctgacaatgggagtactgcggaattgcttttagaatcacct
ccaaaaattattgctgacatgttgctgaatttggcagagtgtctgaatgtggagaatcca
acgacgatgaagaattttcaaactgctactgaaactttgataaccatcttggatgctttt
aattttggtgctatggctggtattaaaatggatctcttgcgaactattgaacgcacggca
ttgttctgtgatgaaaatatgtcgagcttaaaacaagtgctggaagcggaagccaaactg
gtagttggtgctaatttgttcgaacatttgataggatattttaaaacgtgcgcgttgttt
ttgttgaagtgttttcgtaatctttgttctgaatctaccaactcactgcaatgcttgaaa
aaagctttcagggatacgttcactgcacctcatttcaaactgataaattatgtaatagag
accaccacaccccatgtcgcttcagctgatgaaattgcactggcattgtgcaacgaagaa
gacaaaccgattctagaggacaatgtcgacaattctttactgctcagattttttacccat
tttccatttttgaactctgcctccatgcttcatgctggacattgttcatttgctcattgc
ttaactgcagtaccggtggtctgcaagtattttttttaccaatttcactgcaaagtgaaa
tgcaggttattatcatttgtttttacttcgtcgattctacaaacgaacgttctatttggc
ttggtctacctgggtcgcagttcgtgctgttcttgccgtttcttattgatcttcgacaat
tggttgtttttccggtcgtctgattggtcaatgcttgtcgggaatgctaaatgtgcagaa
tcagttgggcaaatcactgtcgacggtcaagaagctatttttattccaattactttgcca
tcgtcggttggttcattattattaccgccttcgcagacatttactgcagatttggctgag
ttgatgcagccaggtttgcaaatagcgacaacagtaccgaacgcaggcgagtcgttggtg
ccagtgaaatcgtcgtctgacagtggaacgggatcattatccgcggtctctttatttcac
ggtcagtcgtatccggtggccgacggcaacgagacctctcggtcttcggttgtgcacttg
caggcaatgtgtccaagtccggggcgagcggttgaagacggttggtcttcgtcgaaggtt
ggatcctccgttggttgccctaccggcctgacggacactactggccgaaaatcatcgacc
aggtcgttggtgccgatattgcccaaaccgccgccactggccagttgtcagccgaagcag
atccagccgactgtaattgtccaccagccacagacgattgtactgccggtgggcgaggtc
ggctccacgaggactgacgcggctgtggacccaagccagaccccactgtggttatcattt
gaaacttctgctgaccagctgaccaatgttgctggtgttggtcaaggtcagctgaccgcg
gtcaacttgcccgaagaggcggtgaatgtgggcgcgccgtctttgtttaccgtgcagccg
atggacagtggtaagtcgttgtaccaaccgtcgaagtcagactgcccgtcagcatcgcct
gtgctgatccaactggctacttcctcgtttgcgtgtccgtcggtcagcggcggcggcggg
ggtggtgtcgggtcatcgtccctcgcctatgaccagccacggattgacaacaaagcggac
aatgttccgcagccgcctggtcacaacgagccgacagccagtgcatctaatgtagcagcg
gttgctgattattcgtcatcacttgaatcttcccaacaaagtcagcagcagtactggctt
atacaatccggaaccgctggagccggcggtcagctaatttcgatgcagccggcgaacggg
agctctacactcgtaacgactgcatctgctccaagtggtgatcagcaacagcaagagcat
agcacaaaattaccggtacaaccgattgttattccgcacggtcaacttgcggctacgtct
ggcaacgtcggtcactcgcagttggtatctcctcgggcgttgcttgtcggcaatagccat
ttccaacaagatccaaatgatccgtccaaatggacaatgataccagtaaatgtcggttcg
aatggaaaagcgccagtggcatcgttgtccggcgctacggctttattggccgtatcgcct
acgccgaccctgatggatttgtccctttttaccgccgctccgaacaattctgcaagcgtt
aacaaacagtcgtctgttcagtctgaaacagcggcaacggcatcagcaacgtcaaaacgt
ctgaaaagaatcgcttgcagctgtccaatatgcaaattgaacgaaacgaaaccaactagt
gaacgtttgaagtatcacgtttgtcatattgctaattgtggacgaacatacggaaagaca
tcccacttgcgtgctcatctacggtggcacatgggtgaacggccattttcgtgtgactgg
ccactttgtgagaaacggttcaccaggtcggatgagttgcagcgtcatcaccgcactcac
acaggagagaagagatttctttgctgtatttgtcagaaacgtttcctgcgcagtgatcat
ttgacaaagcacaagaagacacattgtcaagctgggaacaaagacgcgactgttgaaaca
agcagtcacgattcggacaaaacaaataacgctttggaagtcgactgcagcaacagcagt
gctggatga
DBGET
integrated database retrieval system
