Trichinella spiralis: Tsp_05508
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Entry
Tsp_05508 CDS
T01609
Name
(RefSeq) importin subunit beta-1
KO
K14293
importin subunit beta-1
Organism
tsp
Trichinella spiralis
Pathway
tsp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tsp_05508
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_05508
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_05508
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
Tsp_05508
Pre-60S particles
Tsp_05508
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Tsp_05508
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_IMB1
HEAT_EZ
HEAT
TPR_CAND1
HEAT_EF3_N
HEAT_2
IBN_N
TPR_TNPO3_IPO13_3rd
Htt_N-HEAT_1
Arm
TPR_LAA1_C
HEAT_GCN1_C_2
Motif
Other DBs
NCBI-GeneID:
10913315
NCBI-ProteinID:
XP_003371850
LinkDB
All DBs
Position
Unknown
AA seq
986 aa
AA seq
DB search
MVGHLKSCSTVSNHFALGVPSGWCLCSWIVIVFYKEMSTDQLREALIKTISQNPNDLSAA
FEYLHSCSEANLGSFAKNLSELLTNASEQAFIRQAAGLQLKNVLIAKDVNVRSERLQKWE
SIPIEVRTAVKLNVLNSLGTETVRPSIAAQCVASIAYAEFPMNHWPECIPKLATNVTAAD
SSENTKSSSLESLGYICSDLNPTVLRPFADQILTAIIHGMQKNEKSEYVRLVATNALSDS
LEFIATNFEREFTTYFCEKLLTISILLFQTFLSACCTRCNLSAMDCVRLTTERNVIMQVI
CETTQSANESLKVAALQCLVKVMSLYYQHMEYYMPAALFSISVEAMKSSNQDVALQGIEF
WSNVCDEELALASDEEEAKEKGKTLEVVCRNYAKQALPYVMPILLETLARQVDNDDDDEW
VPAKAAGVCIMLLAQCVGDDIVAHAMPFITKNIASTDWHFRDASVMAFVIACIQLLTCFF
AIGSILDGPNVKILKPAVAQALPFLLTLTKDPETAVRDTTAWCIGRICDLVKEVVVEESM
LASLLPALIEALQQEPRVASNICWALSSLTSAVYEVSLQQTPHGEQPATYVLSPCFAGLV
EQLLQTADRTDAYQSNLRIAAYESLMSLIKDSPKDCYTVVQNTLLVILKRLNDLLQMEPN
LQSANERSQFYDIEGLLCAMLMTVVRRMTAQDLQRIADPIMNCLLQIMKNSCEREGGGAM
EDALLASASFAEGDDVDLLGHVSGLGDSFQKYMTMFFPYVLIALKNREEYQVCSAAVGVC
DDLSRVLKDRFAPYVPELMQLLYEILADASVEKSVKPNVLSLFGDIAMALENNFNPYLNL
VTQALASALNTEMNEDDYYQMEYVLNLRENCIVAFTGLLHGLKGNRESLDFLRPFVLQFI
NNADKLILCEFASEEMLTSFCGMVGDVITVYGTTILPNLNQRVLSEVLGRGRRVKKVKSR
SVAVWATEELKKNTDNVKKKERFEHQ
NT seq
2961 nt
NT seq
+upstream
nt +downstream
nt
atggtaggacatttaaaaagttgctctactgtatctaatcatttcgcgcttggtgttcct
agcggttggtgtctttgctcttggatagtgattgttttctataaagagatgtctacagat
cagctacgagaagctctcattaagactatttcacaaaatccaaatgatttgagtgccgca
tttgagtatttacattcgtgttctgaagcaaatttgggaagttttgctaaaaatttgtca
gaattgttgaccaatgcatcagaacaagccttcattcgacaagctgctggtttacaattg
aaaaatgttttgatagcaaaagatgtgaatgttcgaagcgaaagactgcaaaagtgggaa
agtattccaatagaagtgcgaactgcggtgaaattaaacgttcttaacagtttgggcaca
gaaacagttcgcccatcaatcgcggcacagtgcgttgccagcattgcgtatgctgaattt
ccaatgaatcattggccagaatgtattccaaaattagctacaaatgttacagcagccgat
tcgtctgaaaacacgaaaagttcttctttggaatctctaggatacatctgcagtgatttg
aatccaactgtccttcgcccattcgctgatcaaatactcaccgcgatcatacatggaatg
cagaaaaatgaaaaatctgaatatgtgagattagtggccactaatgcactttccgattcg
cttgaatttatcgcaaccaattttgaacgtgagttcactacgtatttttgcgagaaatta
ttgacaatatcaatactactctttcaaacattcttgtctgcatgttgtacacgttgcaat
ttatcagcgatggattgcgtccgacttaccaccgaacgtaacgtcatcatgcaagtgatt
tgtgaaactactcagtcagcaaacgaaagtttgaaagttgctgcgctacaatgtttggtg
aaggttatgtctctttattaccaacatatggagtactacatgccagcggcattgttttca
atatctgtggaagccatgaagtcatccaatcaggatgttgctttgcaaggcatagagttt
tggtctaacgtttgtgacgaggagcttgctttagcttctgatgaagaagaagcaaaagaa
aaaggaaagactcttgaagtggtttgtcgcaattatgctaagcaggcgttgccatacgta
atgccaattttgcttgaaacattggcacgtcaagtggacaacgatgacgatgacgagtgg
gtccctgctaaagcggctggagtttgtattatgcttttggctcagtgtgttggcgatgat
attgtagcgcatgcgatgcctttcatcacgaagaatatcgcatctacagattggcatttt
cgcgatgcttcagtgatggcatttgttattgcctgcatacaattgttaacttgttttttc
gcaataggttccatcttggatggtccgaatgtaaaaattctgaagccggcagtagcacaa
gcattaccatttttgctaactttgaccaaagatccggaaacagccgttcgcgacacaact
gcttggtgcattgggcgtatttgtgatttggtcaaggaagtggttgtggaagagagtatg
ctggcatcgttgcttccggcgttgattgaagcattgcaacaagagccacgagttgcgtcg
aacatttgttgggctttgtcctctttgacgtcggccgtttacgaagtcagcttgcagcag
acaccacacggtgaacagccggctacttatgtgctgtctccttgctttgcaggcttggtt
gaacagcttttgcagaccgctgatcgcactgatgcatatcagtcgaatttgcgcattgca
gcttacgaatcgttgatgtcgttgatcaaagacagtccaaaggattgctacacagtggtg
cagaatactctgttggtaatattgaagcgtttgaacgaccttctgcagatggaaccgaac
ctgcagagtgcgaacgaacgttctcagttttacgacatcgaaggcttgctttgcgcgatg
ctgatgaccgttgtccgacgaatgactgcgcaggatttgcaacgaatcgcagatccgatc
atgaattgtctgctacagataatgaagaacagctgcgaacgagaaggaggcggtgcgatg
gaagatgcgctgcttgcatcggctagctttgcagaaggtgatgatgttgatttactggga
cacgtttcaggcttgggagattcattccagaagtacatgactatgtttttcccttacgta
ttgattgcgctgaaaaatcgtgaagaatatcaagtttgctctgctgcggttggagtgtgt
gatgatttgtcccgtgttttgaaagaccgtttcgcaccttacgtgccagagttgatgcag
cttctgtatgaaatactggctgacgcaagcgtggagaaaagcgtgaaaccgaacgtgctg
tcgttgtttggggacattgctatggctttggaaaataatttcaatccttacttgaatctg
gtgactcaagctttggcatcagcgttgaataccgagatgaacgaggatgattactatcag
atggagtacgtgctcaacttgcgcgaaaattgcatcgttgctttcacgggccttttgcat
ggtctcaagggcaatcgtgagagtttggatttcttgcgaccgtttgtcttgcaatttatc
aacaatgctgacaagttgattttgtgcgaattcgcatctgaagaaatgttgacatcattt
tgtggaatggtcggggatgtgattaccgtttatggaacgaccatattgcctaatctcaat
cagcgagttttgtccgaggtgttggggcgtggtcgtcgtgtgaagaaggtgaagtcgcgt
agtgttgctgtgtgggccactgaagaattgaaaaagaataccgataatgtgaagaagaaa
gagagatttgaacatcaataa
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