Trichinella spiralis: Tsp_05558
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Entry
Tsp_05558 CDS
T01609
Name
(RefSeq) putative RNA methyltransferase NOL1
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_05558
Enzymes [BR:
tsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
Tsp_05558
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
Tsp_05558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
FtsJ
TPR_ESP1
Motif
Other DBs
NCBI-GeneID:
10913396
NCBI-ProteinID:
XP_003371930
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MSTSVTKISDRKVIGKLKINNDDSDEYIEDDNFLNDESDADSENESSVEHEPSVKFENNV
HAEEMLNDDETHLNMTESNSDEELNNSDSLYDRVKEIVNMLNKFKDVSNTNASLKSRSYY
VQKLKKYLCSFYGYNEFIMEKLIHIFKINELLEFLQANESQRPLVIRCNTLKIRRKDLAQ
SLTSRGVNLQPLGKWSKVGLVVYGSQVPIGATPEYMCGFYILQGASSFMPVLALDPQEDE
KILDLCAAPGGKSSYISAMMKNTGILIANDVSRDRCKAITSNFHRLGVRNAMVTCLDGRH
FKQILFDRVLLDAPCSGSGVISKDVSVKVSKNLLDIQRCATLQKELILAAIDRLDARSPK
GSILVYSTCSIFVEENEAVIDYALRKRNVKLVDTGLPFGIEGFVRFREYRFHPTMKYCRR
FYPHKHNMDGFFVAKLKKFSNEVPGMQQKYFLSVLKSSFFKLFLCNFSGKKR
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatcggtgacaaagatatctgatcgcaaagtgattggaaagttgaaaattaat
aatgatgattccgatgaatatattgaggacgataattttttaaatgatgagagcgatgct
gatagtgaaaatgaatcgtctgttgaacatgaaccgtccgttaaatttgaaaataacgta
catgctgaggaaatgttgaacgacgacgagacacatttgaatatgactgaaagtaacagt
gatgaagaattgaacaattctgattctctttatgatcgtgtcaaagaaattgtgaacatg
ctgaataaattcaaagatgtttcaaataccaatgcttcattgaaaagccgatcctattat
gtgcaaaagctaaaaaaatatctttgttctttttatggttataatgaattcatcatggag
aagctgattcacatttttaaaattaatgaattgttagaatttttacaagcaaatgaatcc
cagcgaccgttggtgatacgatgtaacactttgaaaataagaaggaaagatttagctcag
agcttaacatcgcgcggtgtaaatttgcagccgttaggaaagtggtccaaagttggtctg
gttgtttatggttcacaggtgccaataggggcaactccagaatatatgtgcggattttat
attttacaaggcgctagcagttttatgcctgtattagcgttggatcctcaagaggatgaa
aaaatcttggatttatgtgcagctcctggtggcaagagcagctatatttctgcgatgatg
aaaaacacaggcatattgattgcaaatgatgtcagtcgtgatcgttgtaaagcaataacg
tcaaattttcatcgtcttggcgtgagaaatgcaatggtaacttgtttggatggacgccat
tttaagcagatccttttcgatcgagttctgttggatgctccttgcagtggctctggtgtt
atatctaaagatgtttctgtgaaagtgtcgaagaatttattggacatacaaagatgtgca
actcttcaaaaagaactaatattggcagccattgaccgtttggatgcccgttcacctaaa
ggaagcattttggtttattcaacatgttctatttttgttgaagaaaacgaagcagtaatc
gattatgctttgaggaagcggaatgtgaaattggtagacactggattaccgtttggcata
gaaggttttgttcgatttcgcgaatatcgctttcatccaactatgaaatattgtcgtcga
ttctatccacataagcacaacatggatggcttttttgtggcaaagctgaaaaagttttcc
aacgaagtaccaggtatgcagcaaaaatattttttaagtgttttgaaaagtagttttttt
aaattatttttgtgtaattttagcggcaaaaaaagatga
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