KEGG   Trichinella spiralis: Tsp_05623
Entry
Tsp_05623         CDS       T01609                                 
Name
(RefSeq) LSM14 protein
  KO
K18749  protein LSM14
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tsp03019]
    Tsp_05623
Messenger RNA biogenesis [BR:tsp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     Tsp_05623
SSDB
Motif
Pfam: LSM14 SM-ATX FDF TFIIA AF-4
Other DBs
NCBI-GeneID: 10913433
NCBI-ProteinID: XP_003371967
LinkDB
Position
Unknown
AA seq 456 aa
MNAPLLGSKISLISKSEIRYEGILYTVDPEQSSIALAKVRSFGTEDRPAEQVVPPRNEVY
EYIIFRASDIKDLMVRETPQPAPVVCAGLHYDPAILSVSKNSGGGFSVGQAQQQQQNAFN
QGSAASGRRLSSPENEMPAPPVNTGHVVRGGRTHRSRNTGGIRQHTAAEGEQQRRQQQPQ
QVHQQQQQQHQQNNNSAHHQPQAQHDQQQPQQQQQQQQQLHQGRRNRNRSSAANQGNNLP
NRNSFRNADEHNNNNSNNNGNQQMRRRPPPVRRFQGNGFARHNGGGFNNSNNGQYRGYTP
PVPGAVAPFPGMNMYRPKLFYRTDYDFEMANKEFLQKMENLKDEMKAAKINGGGGAEEGS
DKESLDTNEKVEKVVDEEVKEEQPCYDKEKSFFDNISCEAHEQTEGKPVPKHRNERYLNA
ITFGSVPFRNYGGRRNGPGGQNQAVHFASRQAARSR
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgaacgctccgttgcttggttcgaagatcagtttaatttccaagtcggaaattcgttac
gaaggcatactctacacggttgatcctgaacaatcgtcaatcgctttggccaaagtgaga
tcatttggcactgaagatcgtccagccgaacaagtggtaccaccaagaaatgaagtttat
gagtacatcattttccgcgcaagtgatatcaaagatttgatggttcgcgaaactccacaa
ccagctcccgtcgtctgtgctggtttgcattacgatccagctatactgtcggtttccaag
aattctggtggcggtttcagcgtcggacaagcacaacaacaacagcagaatgcctttaac
caaggcagtgctgcttctggtcgtcgtctcagctcaccagaaaacgaaatgccagcaccg
ccggtgaacactggtcacgtggttcgtgggggacggactcatcgtagtcgtaatactggc
ggaattcggcagcacactgcggctgaaggtgaacagcagcgtcgtcagcaacagccgcaa
caagtacaccaacaacaacagcaacagcatcaacaaaacaacaattctgcgcatcatcag
ccgcaagctcagcacgatcaacagcaaccgcagcaacaacaacagcagcagcaacagttg
catcagggtcgccgtaatcgtaatcgttcgtcggcggccaatcagggcaacaatttgccg
aatcgcaactcgtttcgaaatgctgacgaacataacaacaacaacagcaacaacaacgga
aatcagcagatgcgtcgtcgaccaccgcctgttcgacgttttcaaggaaatggatttgcg
cgccacaacggcggtggctttaacaattccaacaacggacagtaccgtggctacacgccg
ccggttccaggagcggtggctccattcccgggcatgaacatgtaccgtccgaagttgttc
taccgtaccgattatgattttgaaatggcgaacaaggagtttttgcaaaagatggaaaat
ttgaaggacgaaatgaaggcggcaaaaattaacggtggtggtggtgctgaagaaggttca
gacaaagaatctttggatacgaatgaaaaggtggagaaagttgtcgacgaagaggtcaaa
gaggaacaaccgtgctatgataaggagaagtcctttttcgacaacatttcttgtgaagcg
cacgaacaaactgaagggaagccagtaccgaagcatcgcaatgaacgttatttgaatgcg
atcaccttcggtagtgttccattccgcaactacggaggacgtaggaatggtcctggtggg
caaaatcaggcggtccattttgcttcacgccaggccgctcgttctcgttag

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