Trichinella spiralis: Tsp_05643
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Entry
Tsp_05643 CDS
T01609
Name
(RefSeq) sorting nexin-2
KO
K17917
sorting nexin-1/2
Organism
tsp
Trichinella spiralis
Pathway
tsp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
Tsp_05643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_05643
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
tsp04990
]
Tsp_05643
Membrane trafficking [BR:
tsp04131
]
Endocytosis
Macropinocytosis
Sorting nexins
Tsp_05643
Domain-containing proteins not elsewhere classified [BR:
tsp04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
Tsp_05643
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps5
PX
BAR_3_WASP_bdg
RavJ_Peptidase
DASH_Dam1
GrpE
FCH
DUF3410
Motif
Other DBs
NCBI-GeneID:
10913455
NCBI-ProteinID:
XP_003371989
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MYDPLCVAGEDGKGSDADLFEGIDDEIDISDTPTGKEAKLRLDDSSHRVTSKGGRDTKSK
DLLQSTSSNYQYNGLFDSPAEVPVTGGGGLNEVRLTPPGKATSASFGPSVRKISEDPAKD
SNLELHLNIDIEKYEKRGEGVGSFVVYKVVTKLPVLASGFGKREYSVWRRFSDFLGLHDS
LAEKYIATGRIIPPAPSKNVIGMTKTKMVKGTVEEDPVTCEFLERRRASLERYIRRTALH
PVLVQDPIFRDFITLEGELPRAIQTAALSVSGVRRLWDRVSDTLNKMACKMDDNDAWFNE
KQYEIEQLDDELRKLNHKTEQLVNMRKEYAHSTESFCKSLSMLTACEENTSLSRALSSLC
ETMEKISQVHQDQAEKDFFILSEMLKDYIALIDIVKAVFFERVKAWNYVQTAQQTLNKRR
EYKCRLELAGKTERLSQAAKEVDEWSSKLTTAEANFETISKNIQKEYKRFELHRVHEFKQ
MLIHLLETIASSQQQKRREFYDHQLVEYVVNWRYPQLINRQNKQAIVVFAEWRGKIRRFR
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgtatgatcctctgtgcgttgcgggtgaggatggaaaaggcagtgacgccgacttgttc
gaaggaatcgacgatgaaatagacatcagcgacacgccgacaggaaaagaagcgaaactt
cgcctcgatgactcatcgcatcgtgttacatccaagggcggtcgagatacgaaaagcaaa
gatctactccagtcgaccagttcgaattaccaatacaacggtttgttcgattctccggct
gaggtgccggtcaccgggggcggtggcttgaacgaagttcgtctgaccccgcccggcaag
gcgaccagtgccagctttggtccgagcgtgagaaaaatttccgaagatccggccaaggac
tcgaatttggaactgcatctcaatattgacattgaaaagtatgaaaaacgaggtgaaggt
gtcggttcgtttgtcgtttacaaagttgtgaccaaattgccagtattggcgtccggattc
ggtaaacgtgaatacagcgtctggcgtcgcttcagcgattttttgggcttgcacgacagt
ttggccgaaaagtacattgccactggccgaatcatacctccagcaccgtccaagaatgtg
atcggcatgaccaagacgaagatggtcaagggtactgtagaagaagacccggtgacgtgt
gaatttttggaacgtcgtcgagcttcgttggaacgctacatccgtcgaacggcgttgcat
ccagttttagtccaagatccaatatttcgtgatttcatcacactggaaggagaattgcca
cgggctatacaaacggccgcgctgagcgtttccggcgtgcggcgtctttgggatcgcgtc
agcgatacgttgaacaagatggcttgcaaaatggacgacaacgatgcttggttcaacgag
aagcagtacgaaattgaacagctcgacgacgaattgcgcaaattgaatcacaaaaccgaa
cagctagttaatatgcgtaaagaatatgcgcattcgacggaatcgttttgcaaatcgttg
tccatgctcactgcctgtgaggagaacacgtcgctgtcgcgggctctttcgtcgctttgt
gagacgatggaaaaaatttcccaagtccaccaagaccaagctgaaaaggattttttcatt
ctcagcgaaatgctgaaagactacatcgctttgatcgacattgtcaaggcggtgtttttc
gaaagagtgaaagcgtggaattatgtgcaaactgcacagcaaacgttgaacaaacgccgc
gaatataaatgtcgtcttgaattggcaggcaaaacggagagactgtcgcaggcggctaaa
gaagttgacgagtggagttcgaaattgaccaccgccgaagccaatttcgaaactatcagc
aaaaatatacaaaaagaatacaaacgattcgagttgcatcgcgtgcatgaattcaagcaa
atgttgattcatctactggaaacgatcgcctcctcacagcaacagaagcgaagggaattt
tatgatcatcagttggtggaatatgttgtcaattggcggtatccgcagctgattaatcgc
caaaacaaacaggccatcgttgtatttgctgaatggcgtggaaagattcgacgttttcgc
tag
DBGET
integrated database retrieval system
