Trichinella spiralis: Tsp_05746
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Entry
Tsp_05746 CDS
T01609
Name
(RefSeq) hydroxyacylglutathione hydrolase
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_05746
Enzymes [BR:
tsp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
Tsp_05746
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
Tsp_05746
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAGH_C
zf-CCCH_4
zf-CCCH
zf_CCCH_4
Torus
Lactamase_B
zf-RING_2
zf-CCCH_DUS3L
zf-C3HC4
zf-CCCH_2
zf-CCCH_12
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-CCCH_PARP12
IBR_1
Motif
Other DBs
NCBI-GeneID:
10910393
NCBI-ProteinID:
XP_003380020
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MLTVIPVPALSDNYMYVLTDEERTAVAVVDPVEPMKILNVLKKNNLTLTHVLVTHHHRIK
WNVVFNIFSDHAGGNEELSNLLHSEGLPRVMFIGGDDRIPCLNEKVVHGQELKIGEISVL
CVHTPCHTRGHICYYVTDKKNDKVVFTGDTLFIGGCGRFFEGTGRDMYEALINRLGNLPN
DTKVYCGHEYTLSNLKFALTVEPENSDLKKYMETVQAMYFEKQLDEGKFTVPSLIGNEKK
FNPFMRVMESSLKKYANADDPIAVMNYICDFIEIFGIGKVSLNKTTVKQVMSERENTPTK
HVLCRYYMNGFCRNGQQCTFSHNRADQPSMLCRFPLQDDVFNQVFIHAAMRLRLTYKYDH
IRPSWTLRNLDNVGFPVVDETTAKEDSDIEAATIQLSSLRLEAPAFVPTSGVSSSASSRT
YAEVVGKDETTDNDSVKKQVLCGYNVMGTCPFGEKCTYVHGEMCDLCQRAILIPGDETYN
STHRQECMAEHEKQMEVAFTIARSSDKQCGICMETVMEKADESNRSFGILPNCKHCFCLQ
CIRQWRGTNEFDLKNTRACPECRVISDFVVPSSFWVETAEERACLIDSYKSSLKQRRCKY
YIHGQRECQFGNKCFYRHEDPEGRLIEGDSPRTIRRRMRRMNRNRRRQSNPFHRDFLYLG
RFMEAAIVNEEITGALNDILDESGGEDYFPSDSDDDYYTCKVTSRVESELIASTTSSTTT
TLDEVGVAVAAAAAAVSRFTKGDPVVMMGDDSRIGCRMEAVPRPDSDDGMFGDGGTGRRF
LGEISCDAAGLGDGQPSFGGAIMCATDSVATDETKQNKIHYFN
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccgttattcctgtcccagcgttgagtgataactatatgtatgttcttacggat
gaagagcgtacagcagtagctgttgttgatcctgtggaacccatgaagattcttaatgta
ctcaaaaaaaacaatcttactctcacgcatgttcttgttacccatcatcacagaataaaa
tggaatgttgttttcaatatttttagtgatcatgctggtggaaatgaagagttatcaaat
cttctgcattctgaaggtttgccaagagttatgtttattggtggagacgatcgaattcct
tgtttaaatgaaaaagttgttcacggacaggaactcaagattggtgaaataagcgtattg
tgcgtgcatactccttgtcacactagaggacatatttgttattacgtgactgataaaaag
aatgataaggtggtttttacaggtgatacactattcattggtggatgtggaagatttttc
gaaggcactggaagagatatgtatgaagcacttataaatcgactgggtaatcttccaaac
gatacgaaagtttattgtggccatgagtatacgttgtcaaatttgaaatttgccctcact
gtggaacctgaaaactcagatttaaaaaaatacatggaaactgtgcaggcaatgtatttt
gaaaaacagttggatgaaggtaaatttacagttccatcattaattggaaatgagaaaaaa
tttaatccatttatgcgtgtgatggagtcgtcattgaaaaagtatgcaaatgctgatgat
cctattgctgtgatgaattatatatgtgatttcattgaaatttttggtattggaaaagtt
tctttaaataaaacaactgtaaaacaggtgatgtcggagagagaaaacacgcccaccaaa
cacgtattgtgccgttattatatgaacggtttctgccgcaatggacagcaatgcactttt
tcgcacaatcgagctgatcaaccttcaatgctttgtcgttttcctttgcaagatgatgtt
tttaatcaagtttttattcatgcagcaatgcgactgcgtttaacatataaatacgatcac
atccgaccttcttggacgttaagaaatctagataatgtaggttttcctgtggttgatgag
acgacagcaaaagaggatagtgatattgaggctgcaactatacagttgagctctcttcgt
cttgaagcgcccgcatttgtcccaacttccggtgtcagcagttcagcatcttcacgtacg
tacgctgaagttgttggaaaagatgagacaactgataatgacagtgtaaaaaagcaagtt
ttatgtggatacaacgtgatgggaacttgtccattcggcgagaaatgcacatacgttcac
ggtgagatgtgtgatctctgccaacgagcgattctaattccgggtgatgaaacttataat
tccacacatcgccaggaatgcatggccgaacacgagaaacaaatggaagtggcatttaca
attgctcgcagtagtgataagcagtgtggcatttgcatggaaactgtgatggaaaaggca
gatgaatcgaatcggtcttttggaattttgcccaactgcaagcattgtttttgtcttcag
tgcattcgccaatggcgtgggactaatgagtttgacttgaaaaacacgcgcgcttgccca
gaatgtcgagtgatatccgattttgtagtgccatcgtcattttgggtagaaacagccgaa
gagcgagcttgtttgattgattcttacaaatcctcattgaaacaacgtcgttgcaaatac
tacatacatggacaacgcgaatgtcagtttgggaataaatgcttctaccgtcacgaagat
ccagaaggtcgtttaatcgaaggcgacagtcctcgaacaataagaaggcgtatgcggagg
atgaatcgcaatcgacgccgtcagtcgaatccctttcaccgagatttcctctacctgggt
cggtttatggaagcagctattgtaaacgaagagataacgggagcattgaatgacattttg
gacgaatcaggtggcgaagattattttcccagcgattctgatgacgattattacacctgt
aaggttacatcaagagtggaatctgagctcattgcctcgacaacgtcgtccactacgaca
acgcttgatgaagtcggtgttgctgttgctgctgctgctgctgcggtatcgcgtttcacc
aaaggcgatccggtggtgatgatgggcgatgattctcgaattggctgtcggatggaagct
gtgccacgcccagacagcgatgatggaatgtttggagacggtggaactggtagacgattc
ttaggtgaaataagctgcgacgctgcaggcctaggtgatggccagccgagtttcggcggt
gccatcatgtgtgctaccgattctgtagcaacagatgaaacgaaacaaaacaaaatccac
tattttaattaa
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integrated database retrieval system
