KEGG   Trichinella spiralis: Tsp_05750
Entry
Tsp_05750         CDS       T01609                                 
Name
(RefSeq) proliferating cell nuclear antigen
  KO
K04802  proliferating cell nuclear antigen
Organism
tsp  Trichinella spiralis
Pathway
tsp03030  DNA replication
tsp03410  Base excision repair
tsp03420  Nucleotide excision repair
tsp03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Tsp_05750
   03410 Base excision repair
    Tsp_05750
   03420 Nucleotide excision repair
    Tsp_05750
   03430 Mismatch repair
    Tsp_05750
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tsp03032]
    Tsp_05750
   03400 DNA repair and recombination proteins [BR:tsp03400]
    Tsp_05750
DNA replication proteins [BR:tsp03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Tsp_05750
DNA repair and recombination proteins [BR:tsp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Tsp_05750
   MMR (mismatch excision repair)
    Other MMR factors
     Tsp_05750
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    Tsp_05750
SSDB
Motif
Pfam: PCNA_C PCNA_N Rad1 Rad9 Hus1
Other DBs
NCBI-GeneID: 10910389
NCBI-ProteinID: XP_003380016
LinkDB
Position
Unknown
AA seq 267 aa
MFEAKLASASTFKKVLEAIRELLTDATWDCRESGIALQAMDSSHVALVALKLRAEGFDEY
RCDRSISLGLNLTNMSKIVKTAANDDSLVLRAKEDDDTLALIFQSPNEDRYCQYEIKLMD
LDAEHLGIPDTEYDCVVSMPSSEFSRIVRDLGQIGESLTITCTKSGIIFSSKGDLGTGSI
TLRQTTYMDDEEDNKGVSINMTSPCCVTFASKYLNNFAKASPLSNTVQLSLSSDVPIVVE
YKIEDLGYIRYYLAPKIDDDSEIKTEA
NT seq 804 nt   +upstreamnt  +downstreamnt
atgtttgaagcaaaattagcatctgcatctacttttaaaaaggttcttgaagcaattcga
gaattgctcaccgacgcaacatgggattgtagagaaagcggaattgctttgcaggcgatg
gactctagccatgttgcgttggttgcacttaaacttcgcgccgaaggtttcgatgaatat
cgttgtgaccgatccatttcgcttggcctaaatttgacaaacatgtcaaaaattgtgaag
acagcagcaaatgatgatagcttagtattgcgggctaaggaggatgatgatactttagct
ctgatattccagtcaccaaatgaagatcgttattgtcagtatgaaattaagttgatggat
ctggatgcagaacatcttggaattccggataccgaatatgattgtgttgtctccatgcca
agcagtgaattcagtcgcatagtgcgtgatttgggacaaattggcgaaagtcttaccata
acttgcaccaaaagtggtatcatcttttcgtcgaagggagatcttggcacaggttcgatt
actttgcggcaaacaacatatatggatgatgaggaggataacaaaggtgtctccatcaat
atgacgtcaccatgttgcgtcactttcgcttccaagtatttgaacaattttgcaaaggca
tcgccactgtccaacactgttcagctttctttgtccagcgatgttccaattgttgtggaa
tataaaattgaagatctgggctacattcgatattacttggctcctaaaattgacgacgac
agcgaaattaagaccgaagcgtga

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