Trichinella spiralis: Tsp_05798
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Entry
Tsp_05798 CDS
T01609
Name
(RefSeq) putative MIZ/SP-RING zinc finger
KO
K22403
zinc finger MIZ domain-containing protein
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99973 Transcription
Tsp_05798
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-MIZ
zf-Nse
DDHD
RR_TM4-6
PAT1
Motif
Other DBs
NCBI-GeneID:
10910444
NCBI-ProteinID:
XP_003380071
LinkDB
All DBs
Position
Unknown
AA seq
1165 aa
AA seq
DB search
MRAVVERVEKNALSRCVKRRRKEEEKEAQPENQCFCRRAIFHAFVACTGYFPQMIAVSCC
FWPSDHTSLELLWSRNGSPHGSAYTPSYSGMPPAYANGTTMLNYNSNPLSAATANVAGPV
SGYSGDSTVVNGSKAVTQPTPNVNTCYPPQDMGAGPVPGPFNSAAASVYGPGSTAADFGP
PSAAAPPVAAAVDHNQYAAATYQHQSAPQFSPVLVGYFQIPVYNGQQYPPVGNGPPPSYP
MQGRLMQQNAMTRSQMPVSYMNSGSRVQSSNMTVGQSQSTSALRYSLQQTQQCVTNSGRP
PTALPVMTPTMQAQQQQQQQQQQQQQQQQQQQQQQQSQSLSAQQSQQQSQLQQYPSNMPS
IGQTGATLHHSQQTVVDPTTGAVTPYGTASQPPIVNGPYAKYPPNMPPRNTIYYGNPSSA
SQAAALPGKAVCNYVNQNFNPQSTMTPGYPHVQAVRQTHQMPIVPPNMVPNQRPIYPTAN
QYQVPTPIPALYSDVKPVILPSDDADPRMAFPVKDGVILQPFRLEHNIPVSQICFFIAPE
QFGLLCSDPDLDIQLKCFHADDRLMYNNWPHNANVQIVVNNTPVVVRHIDRPLYVKTLCQ
PNKNTLQIAVQQCCCVWDFSHLFMLSLTSRPPVERVLSNLVRRKLLSVDNAIDKIKRSFQ
LAEMGDGQVADIERMSTTISLKCPITMGKITLPARCQDCRHIQCFDLKAFLILNKDRLHW
QCPLCGRPAILDNLEIDQYVWVGCNPPKRAKTSEANCSTDPSVCNWNVTSVRNYASTSNN
NNPVAATGLQVPIERVPNTSISQIMDMKTTVPPNHTVKKQSQQQQQQQQQQQQQLQQQQQ
YQYYLSPEQQQQMMHQQQQQQMMQQQQQQQQMMQQQQQQQHHHHQQQQQQQQALMNSVGS
GGSAAGGGHQTGSIENGNSRLIAEPSTPKQMLKYGPPTPATPSANPPSVGGPRSVGNPPS
VEGTSGNSGGGGGNSGYVMQQCSTQANLQLNIDGNPTGSAPYTPASVGSAGSQQGSHCVN
VASNEMCNTEFSDLTFDTADLLPGDTASENLGNFFADSTMPDPGEFIQYFESTNFGEFGL
STDRLDVPLFDLEDGKRKSVGILDDISSNPSKLLLDDRKKTANPKKTHLKEEKKRSMAGD
DDDDPLKATLLSSSEMDDILSLLQS
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagtagtagagagagtcgagaaaaatgcactatcgcgttgcgtaaagcggagg
cgaaaagaggaagaaaaagaagcacagcctgaaaatcaatgcttttgtcgtcgagctatt
tttcacgcctttgtcgcatgcacaggttattttccccagatgatagctgtctcttgttgt
ttttggccatccgatcatacatctctcgaattactttggtcgagaaatggctcgccacac
gggtctgcatatactccgtcatattcaggcatgccaccagcctatgcgaacgggaccaca
atgctgaattacaattcgaatcctttgtccgctgcaactgcaaatgtggctgggccagtt
agtgggtacagcggcgattcgactgttgtaaacggttctaaagcagttactcagccaacg
cccaatgtcaatacctgttatccgcctcaggatatgggtgctggtccggtaccaggcccg
ttcaattctgcggccgcttccgtttacgggcctggctcaactgctgctgattttggtcca
ccaagcgcggctgcaccgccggttgctgctgctgtcgatcataatcaatatgctgctgct
acctaccaacatcaatctgctccgcagttttcacctgtgcttgttgggtattttcagatt
cccgtttacaacgggcagcagtatccgccagtgggaaacggcccacctccgtcgtatcca
atgcaaggtcgtctgatgcagcagaacgctatgactcgttcgcagatgccggttagctac
atgaacagcggttctcgcgttcagtcgtccaatatgaccgttggtcaaagtcaatcgaca
tcggcacttcgttattcactgcagcaaactcaacaatgcgtcaccaatagcggacggcca
cctacggcacttccagtgatgacaccgactatgcaagcccaacaacagcagcaacaacaa
cagcaacagcagcagcaacaacaacaacaacaacaacaacagcaacaatcgcagtcgtta
tcagcacagcagtcgcaacagcagtcccaacttcaacagtatccatctaacatgccatcc
attggtcaaacaggtgccacgttacatcattctcagcagaccgttgtcgaccctactacg
ggtgctgtgacgccgtatggtacggcctcccaaccgccaattgtcaatggaccatacgcg
aaatatccgccgaatatgccgccaagaaacacgatctattatggcaatccaagttcggcc
agtcaagccgctgctttgccaggcaaagctgtatgcaattacgtaaatcagaatttcaac
ccacaaagtaccatgacacctggttatccgcacgttcaagcggtacgccaaacgcaccaa
atgccgatcgtgccaccgaacatggttccaaatcagaggccaatctatccgacggcaaat
caataccaagtaccaactcctattcctgcactttattctgatgtcaagcctgtaatttta
ccaagcgacgacgctgatccaagaatggcgtttccggtgaaagatggcgtgattttgcaa
ccctttcgcctggaacacaacattcctgtttcacaaatttgttttttcattgcaccggag
cagtttggtttgctctgctcagacccagatttggatattcaattgaaatgctttcacgct
gatgaccggctgatgtacaacaactggccacacaatgccaacgtgcagattgttgttaac
aatactcctgttgtggttcgccacatagatcgtccattgtacgtcaaaactctttgccaa
cccaacaaaaataccttgcaaattgccgttcagcagtgctgttgtgtatgggatttttcg
catctgttcatgctgagtttgacaagcagaccaccagttgaacgcgtgttgagcaacttg
gttcgtcgcaagctactatcggttgacaatgccattgacaaaatcaaacggtcattccaa
ttggccgagatgggcgacggtcaggttgctgacattgaacggatgtcaaccacgatctct
ttgaaatgcccaatcactatgggcaagataacgcttccggctcgatgtcaagactgccgc
catatacagtgctttgatttgaaagcgtttttaattcttaacaaagatcgtttgcattgg
cagtgtccactttgcgggcgtccagcaattcttgacaatttagaaattgaccaatatgtt
tgggtgggatgcaatcctccgaaacgggcgaaaacttctgaagcaaactgcagtacggac
ccatccgtatgcaactggaacgtgacttcagtccgaaactatgcatcaacgagcaacaat
aataaccctgttgccgctactggtttgcaagttcctattgagcgggttccgaataccagc
atttctcaaattatggacatgaaaacgacagttccaccgaatcatactgtcaagaagcag
tcacagcaacaacagcagcaacaacaacagcagcagcagcaattacaacaacaacaacag
tatcaatattacttgagtccagagcagcaacagcaaatgatgcatcagcagcagcagcag
caaatgatgcaacagcagcagcagcagcaacaaatgatgcaacagcaacagcaacaacag
caccaccaccaccaacaacagcaacaacaacaacaagcattgatgaacagtgtcggtagt
ggtggtagtgctgctggtggtggtcatcagacaggatcgatagagaatggcaacagccgt
ttgattgcagagccttcaacgccaaagcaaatgttaaagtatggcccgccaacaccggcc
acgcccagtgcgaatcctccttctgttggcggtcctcgcagtgtcggcaatccaccgtct
gtggaaggaactagtggcaatagtggtggtggtggtggtaatagtggttatgtgatgcag
cagtgttcaacgcaagcaaatttgcagttgaacatcgacggtaatcctactggatctgcg
ccttacacaccagcctcagtcggcagtgctggcagtcaacaaggatctcattgtgtgaat
gtagcttcgaatgagatgtgcaacacggaattcagcgatctgaccttcgacaccgctgat
ctcttgcccggcgataccgcatcagaaaatttaggaaattttttcgccgactctacaatg
ccagatccgggtgaatttatacaatattttgaaagcacaaattttggtgaattcggtttg
tccactgatcggctcgacgttccattgttcgatttggaagatgggaaacggaaaagcgtt
ggcatactggacgacatttcttccaacccaagcaaattattgctcgacgatcgtaaaaaa
accgctaatccaaagaaaacccatttgaaagaggagaagaagcggtcgatggccggtgac
gacgacgacgatccattaaaggcgaccctgctcagctcaagcgaaatggacgacattttg
tccttgcttcaaagctga
DBGET
integrated database retrieval system