Trichinella spiralis: Tsp_05885
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Entry
Tsp_05885 CDS
T01609
Name
(RefSeq) JmjC domain-containing protein 5
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
adh_short
adh_short_C2
Cupin_8
KR
ARM_KDM8_N
Fez1
TrkA_N
Ldh_1_N
Motif
Other DBs
NCBI-GeneID:
10911027
NCBI-ProteinID:
XP_003380167
LinkDB
All DBs
Position
Unknown
AA seq
1358 aa
AA seq
DB search
MILLVRIGLALLQCCFGYTWSILECFFKKPKSVTDKVIVITGAARGIGKGLALLLAHLHA
KIVLVDLDESTNKQTAEELRQETSACVYAYTADVTDPESMRQVATAIVTNPELGCPDVLV
CSAGVLIPKLLEDHSDVEIYRTMNVNVLGYFWTIRAFYPYILKRGQGHIVAVSSYGGHFG
NSYSCCYSASKFAVRGLMESLEWEIYDHGFGGEIKTTTIYPFFTRTDLLSSCNVTSDVIP
VLTPEETSQGILKAILYEQTEAFIPFYGSLICYFFKGRTFKAIELKDFEATVEICNFMLN
FIWERLNTGHWSEVNISWRLLYTMVSLLLSIAHIANGRLKDALCSCDKGLLLGCPISGNV
LARLASLLHCKMIDTYPLEDMLINDKFDQALASVNDVCEHFEHCVPRVACPSLETFQRDF
LIPQNPVVIEGALESWQAMEKWNIAYLMSKCAYRTVPIEIGSKYTNDEWSQKLLTITDFV
HEYFNPDAREKAYLAQHQLFEQITELKDDIAVPDYCCLQCAPEDVDINAWFGPANTVSPL
HTDPRDNLFAQIDMEKIDYEKFPLVKNVKFYETIVKPGDLLFIPKATGIACDVMSSAGSA
AVQSSLASGLLPSPSNLYYQSLGHITGGEGISRNGSRTPVSQRRVGHFTRARHHSSCDVH
SLCDGVTFERCFDSQLPPADPQIHAGGLKGGFPFSARSSNNSYRQPTLSSHLSHGNLGYL
QSDCDWSADLDPLVKSGRGSNEAPGCGSGSKIVNGRMTTTNCCPADCDALREDLRVAMEK
LNATMGSIKSFWSPELKRERALRKEETAKMNMLQEQLKLSLVNNQKQSVLIEQLQNELRF
QCNSGRSRRFPDDGPLIGHDDYRTVCQERDMYRRDWLISSDAVKELQYQLESQRQLLLSK
DESVKRLLEALHSKGVPASVAQSCAEMELAQNRIVELEEKCSRLQAHCDDLESHLQQSHD
GLSNLRKDAVIESLQDEVASYEAELKRLRSGGAIHEREFTDKMVTDKEYQELKLKIDALR
GKLESKNEMIDQKAQQITELQADKNRLLSELNLLNEQHRISEVGLSTKDRKIDLLEETIR
ERDCELNLIRTRLNSSPGVIQEKKLQVFIESQNEKINDMVRQTEALTKENSLYKELNKTN
GVDLLKAEIERLNQAVDESRSEVDRLLKIIHNSEKEKNEGRESGNDSKRFHSNTENADYQ
SVLMHKDRRIEELEEALKESVSITAEREMAVAQQKLNSQRAEQRIAALKDELKTLQEQYD
ELSIQLKQLRQEKVQSDATIKTMQEERKRYVDEVMQLKGEVLLAAIEEKDAHIAFLENFH
GRKSSEEIDNVKKQKEELLQRLKEENARRDDEGDGIWA
NT seq
4077 nt
NT seq
+upstream
nt +downstream
nt
atgattctgttggttcgaattgggcttgcacttttgcaatgttgctttggttacacttgg
tcaattttggaatgtttcttcaaaaagccaaagtcggtcaccgacaaggttattgtcatt
actggagcagcgcgtggaattggcaaagggcttgcacttttgcttgcacatttgcatgca
aaaattgttctcgttgacctagatgagtcaaccaataagcaaactgccgaggaattgcgc
caagaaacctcagcttgtgtatacgcttacacagccgatgtgacagacccggagagcatg
cgtcaagtggcgactgcaattgttactaatcctgaattgggctgcccggatgtgttggtt
tgcagtgcaggtgtgttgattcctaaacttttggaagatcacagtgatgttgaaatctac
cgcaccatgaacgttaatgttttgggatacttttggactatacgagcattttatccgtat
atactcaaacgaggtcagggtcatattgtagcggtttcctcgtatggtggtcattttgga
aattcatattcctgttgttatagtgccagtaaatttgctgttcgaggattgatggaatcg
ctagagtgggaaatctatgaccacggcttcggtggcgaaattaaaaccactacaatatat
ccatttttcactcgtacagatctactcagttcctgtaatgttacttcggacgtcattccg
gtgttgacccctgaagaaacatcgcaaggcattctcaaagcgatactttacgaacaaaca
gaagctttcatacctttctatggaagtttaatttgttactttttcaaagggcgaactttt
aaagcaattgaattgaaagatttcgaagcaactgttgaaatttgcaattttatgttaaat
tttatttgggaaaggttaaatacaggacattggagtgaagttaacatttcttggcgtcta
ttatataccatggtatcgttattgttatcgattgcgcatattgctaacggtcgtttgaag
gatgcactgtgtagttgtgacaaaggtcttttacttggctgtcctatatccgggaatgtt
cttgccagacttgccagtttgcttcactgcaagatgattgacacttaccctttggaagat
atgcttattaatgataaatttgatcaagcattagcttcagtgaatgatgtttgtgaacat
tttgaacactgtgttcctcgtgtagcatgtccaagcttggaaacatttcagcgtgatttc
ttgattccacagaaccctgttgttattgaaggagctttggaatcatggcaagcaatggag
aaatggaatattgcttatttaatgtcgaaatgtgcttatcgtacagttcctatcgaaatt
ggctcaaagtatactaatgatgaatggtcacagaaactgctgaccataacagattttgtc
catgaatatttcaatcctgatgccagagagaaagcttatttagctcagcatcaacttttt
gaacagataaccgaattgaaagatgatatagctgttcctgattattgctgtcttcaatgt
gccccagaagatgtggatatcaatgcttggtttggtccggcaaatactgtttcaccattg
cacaccgatcctagagacaatctattcgctcagattgacatggaaaaaattgattatgaa
aaatttcctcttgtaaaaaatgtgaaattttatgaaaccattgtaaaaccaggagatcta
ctgtttattccgaaggctactggtattgcttgcgatgtgatgagttcagccggatcggca
gcagtacagtcttcgctggcatcaggcctgttgccgtcgccgtcgaatttgtattatcaa
tctttggggcatattaccggaggtgaagggatatccagaaacggaagccgtacgccagtt
tcgcaacggcgtgttggacatttcaccagagcacgccatcacagttcctgtgacgtgcac
agcctgtgcgacggtgtaacgtttgagcgctgctttgattctcagctaccgccagcggat
ccgcagatccacgccggcggtttgaaaggtggttttccattttcggctcgttcgtcgaac
aattcttaccgtcaaccaaccctttcaagccacttatcccacggcaatttgggctatttg
cagtcggactgcgattggtcagcagatttggatccattggtgaaaagcggcagaggttca
aacgaggcgccaggctgcgggtcaggttctaaaattgtcaacggccgaatgacgacgacc
aactgttgcccggccgactgtgatgcgctgagggaagatctgcgcgttgcgatggaaaag
ctgaatgcgacaatgggaagcatcaagtcgttctggagtcctgaactgaaacgtgaacga
gcactgcgcaaagaggaaactgcgaaaatgaacatgctacaagagcaactgaaattgtca
ttagtcaataatcagaaacaatcggtactaatcgagcaactgcagaatgagctgcgtttc
cagtgcaattcaggccggtctagacgcttcccggatgatggaccactgattggccatgat
gactatcgtacagtttgtcaagaaagagacatgtatcgtcgtgattggttgattagctca
gacgctgtaaaagagttgcagtatcagttggaatctcagaggcaacttttgttgtccaaa
gatgaatcggtgaaacgattgcttgaagcgctgcattcgaaaggtgttccagcatcggtg
gcgcaaagttgtgccgaaatggaactagctcaaaatcgtattgtcgaattggaagaaaaa
tgttccagattgcaggcgcactgcgacgatctcgaatctcacttgcagcaaagccatgat
ggtttgtccaatttgcgaaaagatgcggtaattgaatctttgcaagatgaagtggccagc
tacgaagctgaattgaaacgactgcgttccggtggtgcaatccacgagcgggaatttacc
gataagatggtcactgataaagaataccaagaattgaaattgaagattgacgctttgcgt
ggcaaattggaatcgaaaaatgaaatgattgaccaaaaagcacaacagattactgaatta
caagctgataagaatcgtctgttgtcagaattgaacttgttgaacgagcagcatcgaatt
agcgaagttggtttgagcaccaaagatcgtaaaattgatcttctcgaagagacgatacga
gaacgggattgtgagttgaatttaatccgtacgagattgaactcatcacctggtgtgatt
caggagaagaaattgcaggtattcattgaaagtcagaatgagaaaatcaatgacatggta
cgacagacggaagcgttgactaaagagaattcactttacaaagaattgaacaaaacaaac
ggtgttgacttgctcaaagcagaaattgaacgtctcaaccaagctgtggacgaatcacgc
tctgaggttgaccgtttgttgaaaatcatacacaattcagagaaggaaaaaaatgaaggt
cgtgaaagtggaaacgattcgaaacgatttcattccaatacagaaaatgctgattatcag
tcagttctgatgcacaaagatcgtcgtattgaagagctcgaagaagcgttgaaagaaagc
gtcagcataacagccgaacgtgaaatggccgttgctcagcaaaagttgaatagccaacgg
gcagagcaacggatcgcagctttgaaagatgagctgaaaacactgcaagaacaatacgat
gaactcagtatacaattgaaacagctacgccaagaaaaagtccaaagcgacgccaccatt
aaaacaatgcaagaagagcgcaagcgttacgtcgacgaagtgatgcaactcaaaggagaa
gtattgttggcggcgattgaagaaaaagatgcgcacattgcgtttctggaaaattttcac
ggcagaaagtcgtcggaagaaattgataatgttaaaaagcaaaaggaagaattattgcaa
cgcttgaaagaggaaaatgcacgtcgggatgacgaaggagatggtatttgggcttag
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