Trichinella spiralis: Tsp_05945
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Entry
Tsp_05945 CDS
T01609
Name
(RefSeq) putative tRNA pseudouridine synthase 2
KO
K23497
mitochondrial mRNA pseudouridine synthase TRUB2 [EC:5.4.99.-]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tsp03029
]
Tsp_05945
Mitochondrial biogenesis [BR:
tsp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
Tsp_05945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
Motif
Other DBs
NCBI-GeneID:
10911077
NCBI-ProteinID:
XP_003380216
UniProt:
E5S4X8
LinkDB
All DBs
Position
Unknown
AA seq
383 aa
AA seq
DB search
MIVKTAADAWNLLNGICCIVKPRETSTNTLCKLIVKALCKELNEFDEWEPKTYNRPVFTE
DKKTLLLKIKSYKQQIDYSDHPLVIGINSGCDLIAAMKRLRPLSEYHITGMLGRATIDHS
VQGKIVEKSTYKHVTCTNLNRVLAKLTANNLKAAFDSAGVDLQSQKAFELASQGLVRPRE
DSFPIFYKLCVVQFRKPFFTMKVKCVNEDEASLKTLVHEVGLSAKTTAACVSIRRVRHGH
FSLQHALLVKQISLQNIINNLITCQRIWDWSQQNCQNTSTIKRRPLPEIPTVLDLIPADD
SLAAFEEEEEEECTRNDNIQRKDECPFPSHPTPDQCDPVIFTVKHAQILSKHHGQADVSD
HDANSGQLTNASDKHAGTQTRQP
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaaaaactgcggccgacgcttggaatttattgaatggcatctgttgcattgtt
aagccaagagaaacctctacaaatacgctatgtaaattgattgtaaaagcactgtgcaaa
gagttaaatgaatttgatgagtgggaaccgaaaacttataatcgtcctgtatttactgag
gacaaaaaaactctactgttgaaaattaaaagctataagcagcaaattgattactctgat
catccactagtgattggaataaacagcggttgtgatctcatagctgcaatgaaacgtctt
aggccgttaagtgaatatcacatcactggtatgcttggacgtgccactattgaccatagt
gttcaggggaaaatagtcgaaaagtcaacatacaagcacgtcacttgtacaaacttgaat
cgggtattggcgaaattgactgcaaataatttgaaagcagccttcgattccgctggagtt
gatttacaaagccaaaaagcattcgaactggccagtcaaggtttagttcgcccgcgtgaa
gattcttttcccatattttacaaactttgtgttgtgcaatttcgaaaaccatttttcacc
atgaaagtgaaatgcgtgaacgaagatgaagctagtttgaaaactttagtgcacgaagtt
ggcctgtccgcgaaaactacagccgcttgcgtatctatcagacgtgttcgtcatggtcat
ttttcccttcagcatgctctgctggtgaaacagatcagcttgcaaaatataatcaataat
ttaataacttgtcaacggatttgggattggtcacagcagaactgccaaaacacgtcgaca
atcaagagacgaccgctgccagagattccgaccgttttggatttaattccggcagatgac
agtctagcagcatttgaagaggaagaagaagaggaatgtactagaaatgacaacattcaa
cgcaaagacgaatgcccatttccaagtcatccaaccccagaccagtgcgatccagtaatt
ttcaccgtaaagcatgcgcaaattctgtccaagcaccacggccaggctgatgtaagcgac
catgacgctaactccggccaattgaccaacgcatccgacaagcatgcaggtacgcagacg
aggcaaccatga
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