Trichinella spiralis: Tsp_05969
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Entry
Tsp_05969 CDS
T01609
Name
(RefSeq) pyruvate carboxylase 1
KO
K01958
pyruvate carboxylase [EC:
6.4.1.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp00020
Citrate cycle (TCA cycle)
tsp00620
Pyruvate metabolism
tsp01100
Metabolic pathways
tsp01200
Carbon metabolism
tsp01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Tsp_05969
00620 Pyruvate metabolism
Tsp_05969
Enzymes [BR:
tsp01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.1 pyruvate carboxylase
Tsp_05969
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSase_L_D2
PYC_OADA
Biotin_carb_N
Biotin_carb_C
HMGL-like
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
RimK
HlyD_3
ATP-grasp_3
Motif
Other DBs
NCBI-GeneID:
10911192
NCBI-ProteinID:
XP_003380250
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MIDNDLMFFLIFGYDNFSEIAIRILRALNELQIRSVGIYSEQDVNQMHRLKADEAYLVGR
GMTAVSAYLNIHEIIKLAKTHDVDAIHPGYGFLSERADFAQACHDASITFIGPSPEVMLR
MGDKISARVAAAEAGVSVVPGIENPIENAEEAAEFGKQYGFPVIFKAAYGGGGRGMRRVD
KLDQVQEAFNRATSEALAAFGNGLMFVEKFIERPRHIEVQILGDMYGNIVHLYERDCSVQ
RRHQKIIEIAPAPNLDPQKRQLMLDDAVRLARHVKYENAGTVEFLLDQDGRHYFIEVNAR
LQVEHTVTEDITGVDLVQAQVRIAEGKSLEELHLCQDLVTPIGSALQCRITAEDPSMDFC
PDSGRIEVFRSGEGMGIRIDSASAYAGALISPYYDSLLVKVIAHSRNYKTTVNKMMRALK
EFRIRGVKTNIPFLLNVLNNQRFLDGLVDTCFIDENPDLFKFTPSQNRAQKLLRFLKDVK
VNGPMTPLVTGIPSAKVTPIVPEYDTRPLLKGWRDVLLEKGPVNFAKEIRKNRGILLTDT
TFRDAHQSLLATRVRTYDLQRIAPFLAHAMPNLFSLEMWGGGVIETAISYTGDVADSNRQ
MYNLNYYLKLADEIVKAGTHILCIKDMAGLLKPRSSKVLLSALRDRFPDLPIHVHSHDTA
GVSVASMLACVEAGADIIDVAVDSMSGMTSQPSMGAMVAVLNDSPFHTGKSFFRISVVLI
DDVSIGLDSACSAYWESARQLYGPFECTTTMKSGNADVYVHEIPGGQYTNLQFQAYSLGL
GDKFEQIKRKYVEADALLGKLIKVTPTSKIVGDLAQFMVHNNLDGPTLLKQASTLSFPES
VVQFMQGMIGQPPYGFPEPLRTQILRHRERIDGRPGESLPPVDFETLRQQLQQKHEKQIR
LLQCVTLFICFFYNNQVELEKGKSMRIKMLAKSSLNAEGEREVFLELNGQLRSFLVKDKE
ASKDDTSHPKADPTVIGSVGAPMPGEVLQIKVKEGDVVKMKTPLIVITAMKMEMIIESPI
DGLVKTVFAKPAMKCNAGDLLVLIESQ
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgattgataatgatttgatgttttttcttatttttggttatgataatttcagtgaaatt
gctattcgtatattgcgcgccttgaatgaactgcagatccgctctgttggcatttattca
gaacaggatgtcaatcagatgcatcgtctgaaagcagacgaagcttatttagttggtaga
ggaatgaccgccgtatcggcttatctcaacattcacgaaatcatcaaactggctaaaacg
catgacgttgatgccattcatcctggttatggattcttgtcagaaagggctgactttgct
caagcttgtcatgatgccagtattactttcattggcccttcaccagaagtcatgcttcga
atgggtgacaaaatatctgccagggtcgctgctgctgaagctggagtttctgtggttcct
ggtattgagaatccaattgaaaatgccgaagaagcggctgaatttggcaaacagtacggt
tttcctgttatattcaaagcagcttatggtggtggtggccgaggaatgagacgtgtcgat
aagcttgatcaagtacaagaagctttcaatagggctacttctgaagctcttgctgcattt
ggaaatggattaatgtttgttgagaaatttatcgaaaggccgcgtcatattgaagttcaa
attttaggtgatatgtatggcaatattgtgcacctttacgaacgtgactgtagtgtacaa
cgtcgacaccagaaaataatagaaatagcaccggcaccaaatttggatccgcagaaaaga
caactgatgttggacgacgcggttcgtttggctcgccacgtgaaatacgaaaacgctggt
acggtagaatttttgcttgatcaagatggaaggcattatttcatcgaagtgaacgccagg
cttcaagtggagcatactgtaacagaagacattaccggagtggatttggtccaagctcag
gtgagaattgccgaaggcaaatcactggaagagcttcacttgtgtcaagatttggtgacg
cctattggttcagctttgcaatgtcgtataactgctgaagatccaagcatggatttttgc
cctgattcaggacgtatcgaagtatttcgtagtggagaaggaatgggcattcgcatagac
agcgcatccgcgtatgctggtgcgttgattagtccgtattatgattcactgctggtcaaa
gtgattgcccattctcgaaattacaagaccactgtgaacaaaatgatgcgcgctctgaaa
gagtttcgcattcgtggagtgaagaccaatatcccgtttctgttgaacgtgttgaataac
cagcgctttttggacggcttagtcgacacgtgttttatagacgaaaatccagatttattt
aaatttacgccatcgcagaatcgtgcacaaaaattgcttcgttttttgaaagatgtgaaa
gtgaacggtccaatgacaccgctagtaactggaattccatccgctaaagttactccaatt
gtaccggagtatgatacgcgaccactgttgaaaggttggagagatgtacttcttgaaaag
ggtccggtgaattttgcgaaagaaatacgcaaaaacagaggtattttgttaacggataca
acatttcgagatgcgcatcaaagtttattggcaacacgtgttcgcacttacgatttgcaa
cgaatcgctccatttcttgcccacgctatgcccaacttgttcagcctagaaatgtgggga
ggtggtgttatagagacggcaatttcttatacgggcgacgtggctgattccaaccgacaa
atgtacaatttgaattattatttaaaattggcagacgaaattgtcaaagcgggcacgcat
attctttgtataaaagatatggctggtctgttgaaaccacggtcgtcgaaagtattgtta
tctgctttgcgggatcgatttccggatttgccaattcacgtccactcccatgacactgcc
ggtgtgagcgtggctagcatgttggcttgcgtcgaagctggcgcggatattatcgacgtt
gcggtagattccatgtccggcatgacgtcccagccgagcatgggtgccatggttgccgtc
ttgaatgattctccatttcacactggcaagtcgtttttccgtatttcagtcgtgctgatt
gatgatgttagcattggattggattctgcttgcagcgcttattgggaatcggccagacaa
ttgtacggaccgttcgaatgcactacgacgatgaaaagcggcaatgcggacgtgtatgtg
cacgaaattcccggtggtcagtatacaaatttacaattccaagcctattcgctgggcttg
ggcgacaaatttgagcaaatcaaacggaaatacgtcgaagcggatgcgcttttgggaaag
ctgatcaaagtgactccgacgtcgaaaattgtcggcgatcttgcccaattcatggtccac
aacaatttggatggtcccacgttgttgaagcaggcgtcgacgttgtcctttccggagagt
gttgtgcaattcatgcaaggcatgattggtcaacctccttacggttttccggaaccgctg
cgtacgcagatcttgcgccacagggaacgcatcgacggtcgaccgggagaatcattgcct
ccggtcgattttgaaacccttcgacaacagttgcaacagaaacacgaaaaacagattcga
ttgttacagtgtgtgacgctttttatttgttttttttataataatcaggttgaattggaa
aaagggaaatcgatgcgtattaaaatgctagcgaagagcagtttgaatgctgaaggcgag
cgagaagtgtttttagaattgaatggacaattgagaagcttccttgtgaaagacaaagaa
gccagcaaagatgatacgagtcatccgaaagccgatccaactgtgattggatctgtaggt
gctccgatgcctggggaagtattgcagatcaaagttaaagagggtgatgtagtgaagatg
aaaaccccgttgattgtgatcactgctatgaaaatggagatgatcattgaaagtccaatt
gacggtttagtgaaaactgtatttgctaagccagcgatgaagtgcaacgccggtgatttg
cttgttcttatcgagagtcagtga
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