Trichinella spiralis: Tsp_05996 Help Entry Tsp_05996         CDS       T01609                                  Name (RefSeq) zinc finger protein   KO K22381   E3 ubiquitin-protein ligase ZNF598 [EC:2.3.2.27] Organism tsp  Trichinella spiralis Brite KEGG Orthology (KO) [BR:tsp00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:tsp04121]     Tsp_05996 Enzymes [BR:tsp01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      Tsp_05996 Ubiquitin system [BR:tsp04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     Tsp_05996 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  zf-C3HC4_3 PAH_ZNF598 zf-RING_5 Prok-RING_4 RING_XB3-XBAT31 DUF7565 CtIP_N Motif Other DBs NCBI-GeneID:  10911221 NCBI-ProteinID:  XP_003380279 LinkDB All DBs Position Unknown AA seq 1084 aa AA seqDB search MSAEDGLQCIICFEQREYFCVSSCDHAVCLTCVIRIMMLNDSKECPVCRVVMEKVIAFVG DGKKKTKFVEVLNIPHVTGIRYEEKGIFFTNQELKQFADNLLSHVCQICENRMVFPTFRH LEVHMRHQHERFPCDICTLFSEERQFFTRAALARHRRIGDDKKLGERGHPLCKFCDERYF DADMLFRFASYLFYTLSHCPPFLPFLLHTLDALKDHFRSEHFLCEIDNCANAPYGVNSNH SETMGRYLTRENRHLLELHGEFQQDWHAGSKRRSRRLEALLENKQKGIQQQPSVQQSFHL ENEDFPNLNPNIASSSGVQSNNNYSSTAVTKNWKKSKEVVPLIDDFPPLSSSSDGKVNLN FWHLFSSCIYSKFNFCEFVIAPVVVVDDTADKWSPWSTVNGNKRKGKKKCDFSKGAKTEL LSHTSSAAAKANSELMENQHLCSTSSELADAEQMFRNGNTSDLVKKAEQPPSQYENEFPE LPVKDSLIQKCNRGEPWIQWSSTNKLSKQVAEPKKEPAVLKNLKANQPSEAHQSRSKTKF LLEPIEEKHNEAGSSKTKAKNAKINLTMMNRDADFPPLVNENSMCNTTGMPLLGFKSKLQ SKSRDVVKIDVTVNETKKMPNNADMVEFLSLPGSKDAHTAGNVEYSAKTSANYSAAVLKV QNGSSTAKLKNAKEQQQMKVDELTNKNVKARMKQQTVMDFYNVVVNKLSASLNEDTTVIQ SPFHAQHDSMKLVQKNANKSGAHIDGKKFKDKAGLRSNDHKQVQGKSSQKSAKGSSNLQY CDFYLNLNAHMQNVHGCCSCCCCSWLRKRTIGRMKYNLSEKRKLNRSDNEKNDEKLAKSW PKSSPPPPEAQSLCHLIRLYTYLFINWTLFFNLCDENIIMFLGMDDFTTVGWFIILVEIV DASRVKWDSAERMKKEAKSNCFNFFLHVKYPEFYEKCLPYIENRSGKKWKSGEFLKLSQY EEQSANLRGRLVASMSDNELASFENLLNSFQEGKMLAGDFFSEMMHQLGEGLFLSVFPEM ISLMPNVDMQKKLLRCYITHCVNCGEDLQVRFQSVDLCHICSQVVLSVNYMEHVRLHCEE EEEL NT seq 3255 nt NT seq  +upstreamnt  +downstreamnt atgtccgcggaagacggtttgcagtgtattatttgcttcgagcagcgggaatatttttgc gtcagtagttgtgatcatgcggtctgcttgacttgtgttattcgcattatgatgctaaac gattccaaagaatgtccagtttgtcgtgtagttatggaaaaggtcattgcatttgttggt gatggaaaaaagaagacgaagtttgttgaggtactcaatattcctcatgttactggaatt agatatgaggaaaaagggattttttttacaaaccaagagctgaaacagtttgccgacaat ttgttgtctcatgtttgccaaatatgcgaaaatagaatggtatttccaacgtttcgccat ttggaagtacatatgcgccatcagcacgaaagatttccttgcgacatttgtactttattt tctgaggagaggcagttttttacaagagccgcattggcaaggcatcgtcgtattggggat gacaaaaagctcggtgaacgtgggcatcctttgtgcaagttttgcgatgaacgttatttt gacgccgatatgctgtttcggtttgcatcatatttattctacacactgtcgcactgccca ccatttctgccatttttgctccacacacttgatgcgttgaaagatcattttagaagtgaa cattttctttgtgaaattgataattgtgcaaatgcaccgtacggtgtgaattccaaccat tccgaaacgatgggcagatatctcactcgtgagaatcgccacctacttgaattgcatggc gaattccagcaagactggcacgctggcagtaagcgccgttcaagacgtttggaagctttg ctcgaaaataagcagaaagggatacagcaacagccatcagtgcagcaatcatttcatttg gaaaacgaagactttccaaatttgaatcccaatatagcttcctcgagtggtgttcagtcg aataataattattcttcaactgcagtgacgaaaaattggaaaaagtccaaagaagtggtt ccacttattgatgattttccacctctatcttcaagtagtgatggtaaagtgaatttgaat ttttggcatttatttagctcatgtatttacagcaagtttaatttttgtgaatttgtgata gcaccagtagtagtagtagatgatactgctgacaaatggtccccgtggtctacagtgaac ggtaataaacgtaaaggaaagaaaaaatgtgacttttccaagggcgcaaaaactgaattg ctttctcatacatcatcggctgctgcgaaagcaaattcagagttgatggaaaatcagcat ttatgctccacttcttctgagttagcagatgctgagcaaatgtttcgcaatggtaacacg tctgatcttgtaaagaaagcagaacaaccaccatcacaatatgaaaatgaatttcctgaa cttcctgtaaaagattcgttgattcagaagtgcaatagaggtgaaccatggattcagtgg tcttcgacaaataagctttccaagcaagtggcagaaccgaagaaggaaccggcagtgttg aagaatttaaaagcaaatcaaccatcagaagcacaccaatctcgatcgaagacaaaattt ttgttggaacctatcgaagagaagcataatgaagcaggtagtagtaaaacaaaagcgaaa aatgcgaaaataaatttaaccatgatgaaccgtgatgctgactttccaccattggtgaat gaaaacagtatgtgtaacactactggcatgccattattgggttttaaaagcaagctacag tctaagtctcgtgatgttgtgaaaattgatgtgactgtgaacgaaacgaagaagatgcca aataatgcagatatggtggaattcctatcgctaccaggcagtaaggatgcgcacactgct gggaatgttgaatattctgctaaaactagcgcgaattattcggcggccgtattaaaagtg cagaatggttcatccacagcgaaattgaagaatgcaaaggagcagcagcagatgaaagta gatgaattaacaaataagaacgttaaagcaagaatgaaacaacaaacggtaatggatttt tataatgtagttgtgaataaattaagcgcttctttgaatgaagacacaacggttattcaa tcaccgtttcacgctcagcatgacagtatgaaattggtgcagaaaaatgcgaacaaatca ggtgctcatattgacggtaaaaaattcaaagataaagctggtttacgcagcaatgaccac aagcaagtgcaaggtaaatcgtcgcaaaagagtgcaaaaggatcatcaaatctacagtat tgtgatttttatttaaatttaaatgcgcacatgcaaaatgtgcatgggtgttgtagttgt tgttgttgttcatggttgaggaagagaacgattggtagaatgaaatataatttatcagaa aagagaaaattgaacagaagcgataatgaaaaaaatgacgagaagctggccaaaagttgg ccgaagtcttcaccaccgcctcctgaggcgcagtcgctgtgtcatttgatacgactatat acatatttatttatcaattggacactgttttttaatttatgtgatgaaaatataattatg tttcttgggatggatgattttactactgttggttggttcattatactggtcgaaattgtt gacgctagtcgagtgaaatgggatagcgcagagcgaatgaaaaaagaagcaaaatcgaac tgtttcaacttttttctccacgtgaaatatccggaattttatgaaaaatgtttgccatat attgaaaacagatcaggtaaaaagtggaagagcggagagtttttgaaactgtcacagtat gaagaacaatctgcgaatttgcgtggtcggcttgttgctagcatgtcggataatgaattg gccagttttgaaaatttgctcaacagtttccaagaaggaaaaatgctagccggggatttc ttttccgagatgatgcatcagctcggcgaggggttgttcttgtctgtttttcctgagatg atcagcctgatgccaaatgtagatatgcagaaaaagttgctccgctgctatataacgcat tgtgtcaattgtggagaagatttgcaagttcgattccaatcggtcgacttgtgtcacatt tgttctcaggttgtattgagtgtcaattatatggagcatgtgagacttcattgtgaagaa gaagaagagttgtga

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