Trichinella spiralis: Tsp_06034
Help
Entry
Tsp_06034 CDS
T01609
Name
(RefSeq) putative helix-loop-helix DNA-binding domain protein
KO
K06054
hairy and enhancer of split 1
Organism
tsp
Trichinella spiralis
Pathway
tsp03460
Fanconi anemia pathway
tsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
Tsp_06034
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
Tsp_06034
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_06034
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_06034
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
Tsp_06034
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex binding factors
Tsp_06034
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Hairy_orange
Motif
Other DBs
NCBI-GeneID:
10911361
NCBI-ProteinID:
XP_003380338
LinkDB
All DBs
Position
Unknown
AA seq
299 aa
AA seq
DB search
MVVIDDQSGKLTCCTTNSGLFIEYEIKINNFNRSRASRVPVNKRSELCVARPVSTWRHVS
IGLANKPLMEKRRRARINRSLDELKSMLICSTKPSVNKCKIKNNFPFFLHVKNNSHIFIC
RYLAIRTRDDPIAYGQFISGYTHCIRQLQRFLISSNGTFAPETCRDLIENLMADLKHLTN
EAGQAKVQESSSSSGADSVSSLELASCNDDNETCTSQSSPSPPVASLLGVAHDSPSCLFA
VKTNPDCLLTAAAFPLIHTSFATCSPMTQSESSAFASFRSIRHNECKSVTKNASYWRPW
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgattgatgatcagagtggaaaattaacgtgctgtacgacgaattcggggctt
tttattgaatacgagataaaaatcaacaatttcaatcggtcacgtgccagtcgggtgccg
gtgaacaaacgctcagaactgtgtgtcgcgcgcccagtttcaacctggcgacacgtttcc
attggactggcaaacaagcctttgatggagaaacgtcgtcgtgcgagaattaacagaagc
ttagatgagctgaaatcaatgttgatttgttcgactaaaccttcagtaaataaatgcaaa
ataaaaaacaattttccattttttcttcacgttaaaaataattcacacatattcatatgc
agatacctggccattcgaactcgtgatgatccaatcgcttatggacaattcatttccggt
tatacacattgcataagacagttgcaacgttttttaattagcagcaatggaactttcgca
cctgaaacttgccgagatttgattgaaaatttgatggcagatctgaaacatcttaccaat
gaagctggtcaagctaaagttcaagaatcatcgtcttcttctggtgccgactcggttagc
agtttggaattggctagttgcaatgacgacaatgaaacctgcacttcacaaagttctcct
tcaccaccagtcgcatctctgttgggtgtggcgcacgattcaccgtcatgtttatttgcc
gttaaaacgaatcccgattgtttgctaactgccgcagcttttcctcttattcatacttct
ttcgccacttgctctccaatgactcaatctgaatcgtccgcttttgcatctttcaggtca
atacggcataatgaatgcaaatcagtaactaaaaatgcatcatactggcgtccgtggtaa
DBGET
integrated database retrieval system
