KEGG   Trichinella spiralis: Tsp_06155
Entry
Tsp_06155         CDS       T01609                                 
Name
(RefSeq) U3 small nucleolar RNA-interacting protein 2
  KO
K14793  ribosomal RNA-processing protein 9
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tsp03009]
    Tsp_06155
Ribosome biogenesis [BR:tsp03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    Tsp_06155
SSDB
Motif
Pfam: Beta-prop_WDR3_1st WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_SCAP Beta-prop_EIPR1 NBCH_WD40 Beta-prop_Aladin WDR90_beta-prop_4th Beta-prop_WDR41 Beta-prop_SPT8 Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_IFT122_1st Beta-prop_VPS8 GCS
Other DBs
NCBI-GeneID: 10911552
NCBI-ProteinID: XP_003380448
LinkDB
Position
Unknown
AA seq 533 aa
MKYGNLLTDGGLIKLKLIGNSKMVGEKRNFHKRKSVISNRNKEKWRSEEISSDLDSNEET
ETNAYNVESDEETAHEKRYRLAKQYLSEVEREEREKADNKIIDREAVEHRLQEDAIDEVY
PPQKSIVDNLNLPSQDTFRFLRGHKLSPTCCILSPDGCRIVSGSKDGDTETGEKLHVIDA
NNRAGHRSVSCLAVSSDQKFLCSGGPEKKLRVWDFENMRHLKTFTGHTGAINGVAIRNGY
NQVFSCSSDKCVRVWDLTQMGFVDYLPGHSSAVMDIDCLARERAITCGGSDRTVRIWKVA
EDSQVVFSDRSGCGSTECVKLINENHFVTGADNNTISLWSVFKKNALYVKNNAHDSTGAN
CTDRWISALSTFRHTDLVLSGSCDGTLRFWKCADNLTSLKLKFVLPVTGFINRISCASEA
NMVAVAVGQEHRSGRWWRIPETRNSILVYIYIYLYLYLFTKRNIPYYGASSVVSYSGFCR
SLKNNNGNIPIKQPKLTPRTRPALLVHLTPLLFHCSGVRFGVFHFIFETICSI
NT seq 1602 nt   +upstreamnt  +downstreamnt
atgaaatacggtaaccttctaaccgacgggggcttaatcaaattaaagctcattggaaat
tcgaagatggttggagaaaaaagaaattttcataaacgcaaatcagtgataagtaacaga
aataaagaaaaatggagaagtgaagaaatatcaagcgatttagatagtaacgaagaaact
gaaacaaatgcatataacgtggaatccgatgaagagacagcacacgagaaacgttatcgc
ttagctaagcagtatttaagtgaagtagaacgggaagaaagagagaaggccgataataaa
atcattgatcgcgaagctgttgagcatcgtttacaagaagacgctatagatgaagtttat
cctccgcaaaaaagtattgttgataatttgaatttgccttctcaagatacgtttcgtttc
cttcgtggtcataaattgtcacctacatgttgtattctcagtccggatggttgtagaatt
gtcagtggatctaaagatggggatacggaaaccggggaaaaattgcacgttatagatgca
aacaatcgagctggtcaccgatctgtttcttgtttggcagtctcatctgatcaaaagttt
ttgtgcagtggtggtcctgagaaaaagttacgtgtgtgggattttgaaaacatgcgtcat
ttgaaaacctttactggtcacacaggtgcaataaatggagtagctattcgaaatggttac
aaccaagtattcagttgttcatctgacaaatgcgttcgtgtttgggatctcactcagatg
ggatttgtagattatttacctggacactcgtcagctgtaatggacatcgattgcttagcc
cgagagcgagccattacttgtggaggaagcgatcgtactgtaagaatttggaaagttgct
gaagattctcaagttgtattttcagatagaagcggatgtggatctacggaatgtgtaaaa
cttataaatgaaaatcactttgttacaggagcagacaataatacgataagtttatggtca
gtatttaaaaagaatgcattatatgtaaaaaataatgcacatgattctactggagcaaat
tgtactgaccgatggatcagcgcgttatctacttttagacatactgatttagttttatca
ggttcttgtgacggtactttacgattttggaaatgtgctgacaatttgacatcgttaaaa
ttgaaatttgtattgcctgtaacaggatttatcaacagaattagttgcgcttctgaagct
aatatggtagcggtcgctgttggtcaagagcatcgatcaggtcgttggtggcgtattcct
gaaactcgaaattctattcttgtgtacatatatatatatctatatctatatctgtttacg
aaacgaaatattccatattatggagcttcatcagttgtatcatattcaggtttttgtcga
tctttgaaaaacaacaacggaaacataccaatcaagcaacctaaactgacgccgaggact
cgtccagcattgcttgtccatcttacccctttactattccattgttctggtgtaagattt
ggagttttccatttcatttttgaaacaatttgttcaatataa

DBGET integrated database retrieval system