Trichinella spiralis: Tsp_06173
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Entry
Tsp_06173 CDS
T01609
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsp03041
]
Tsp_06173
Spliceosome [BR:
tsp03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
Tsp_06173
Other components
Complex C specific factors
Tsp_06173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
MvcA_ins
DUF1319
HopW1-1
Motif
Other DBs
NCBI-GeneID:
10911672
NCBI-ProteinID:
XP_003380487
LinkDB
All DBs
Position
Unknown
AA seq
813 aa
AA seq
DB search
MDDEFESFEINENDLDSAFNPFKRRYISKNQQIYGVWADLSDSDRDEDDYDRPSTSRKRK
DYMKEVKFVSGGVKKGEKISKEEKDDAFDLSISPDDSDNDGRTEITSVKSGGGSSAAAFT
HRYYNASKKFNNQMIAGLRDTGPTGQRFGDWERHTKGIGWKLLKKMGYEPGKGLGKQSQG
IAEPVKAVVRPGRGAIGAYGREGNKLLESEDVKVEKEVLDFGNYKKKQQFKRTVTSERKS
HDKATRIVYRTWDEVVQEGGTLKRHWGSSGSASTKIIDMTGTEQKVYDSYELYATKKQSD
AYRSDRTNFDLPELLHNVDLIIHTAEESILRTDRQMKTITDQNQSLEHECNMLQNCLNSD
AQEMQRLEKLDSALDAFGLLVDAGEVSTQDCMRLFKKLQSEFPDEYKLYDLNRLAIDVVL
PIVKEEFVDWEPLQHADHGLQRMLEWRTILEKQREFNGSAKFENFDVYHQLVWLAWLPPV
RRAVQIWNVRMPNPMLSLLTVWQEVIPGWILENLIEQFIVPKIETEVEEWNPLSDVQPVH
SWFHPWLGFLGDRLQPLYSSIRAKLGRALTHWNPSDRSAKWMLMPWKGVFTPSSMSGFLA
RHVVPKLELCLVNFVVDPSNQCLQPWADVMDWLDMIDPGVIGDLLLRHFFPKWLHVLQTW
LLCPQPNYEEIQHWYSNWKSLFSEQLISLDGVRRQFNCALEIMNRALSGQLTADTVPQLR
LHSAPFNPNLITAAAAPPSTMYLPVNMKDILEQKAAEMSLFFLPLNNRYREGKPIYRFGT
QTIYIDRNVIFSQESNGDWRPISLGELLTSAFQ
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaatttgaatcatttgaaattaatgaaaacgatttggattcagcatttaat
ccgttcaaacgaaggtatatttcgaaaaatcagcaaatttatggcgtttgggccgatcta
tcggatagcgatcgagatgaggatgattatgatcgtccttcgacctcaaggaaacgtaaa
gattacatgaaagaagtgaaatttgtctctggtggagtgaaaaagggagaaaaaatatcg
aaagaggaaaaagatgatgcattcgatttgtcaatttctccggatgacagtgataatgat
ggacgaactgagataacgtctgtgaaaagtggtggtggtagctctgctgctgcttttact
catcgttattataatgcttcgaaaaagtttaacaatcaaatgattgctggcttgcgtgat
actggacccactggacagcgtttcggcgactgggaaaggcacacgaaaggtattggctgg
aaattgttgaaaaagatgggctacgagcccggaaaaggtcttggcaaacaaagtcaaggt
attgccgaaccagtgaaagctgtagtcagaccgggtcgtggtgccattggagcctacgga
cgcgaaggtaacaaattattggaatctgaagatgtgaaagtggaaaaggaagttttggac
tttggaaattataaaaagaagcagcagtttaagagaaccgtcacatcggagaggaaatca
cacgacaaagctacacgtatcgtctacaggacttgggacgaggtggttcaagaaggtgga
acgttgaagcgccactgggggtcatcgggcagcgcgtcgaccaaaattatcgacatgacc
ggcaccgagcagaaggtttacgacagttatgaactgtacgcgacgaagaagcaaagcgat
gcgtaccgttcggacaggaccaatttcgatcttcctgaattgttgcacaacgtggatttg
ataattcacacggccgaagagtcgatcttgcggaccgacagacagatgaagacgatcact
gatcagaaccaatctttggaacacgagtgcaatatgttgcagaactgtttgaacagtgac
gcacaagagatgcagcgtttggagaagttggactctgctttggatgcattcggcttgttg
gttgacgctggcgaggtgtcgacccaagattgcatgcgcttgttcaagaagttgcagtcc
gaatttcccgacgagtacaagttgtacgatttgaaccgtttggccattgacgtcgtcctt
cccattgtcaaggaagaatttgtcgactgggaaccgttgcagcacgccgatcacggtctg
cagaggatgctcgaatggcgcacaattttggaaaagcaacgggaattcaacggaagcgcg
aaatttgaaaatttcgacgtctaccaccagctggtttggcttgcctggctgcctcctgta
cgtcgggccgtgcaaatttggaacgtcagaatgccgaatccgatgctgtctttgctcacg
gtctggcaagaggtgattccaggctggattttggaaaatttgatcgaacaattcatcgtg
ccgaaaattgaaaccgaagtcgaagaatggaacccgctgagcgacgtgcagccggtgcat
tcgtggttccacccttggttgggcttcctcggcgaccgactgcaaccgttgtactcgagc
attcgtgccaagctcggtcgtgcgctgacccactggaacccgagcgaccgttctgccaaa
tggatgctcatgccgtggaaaggtgtgttcacaccgtccagcatgagcggctttcttgcc
aggcacgtcgtgcccaaattggagctctgcttggtgaatttcgtcgtcgatccgtccaat
cagtgtttgcaaccgtgggcggacgtgatggactggctggacatgatcgatccaggcgtc
attggcgatctgttgttgcgtcatttttttcccaaatggttgcatgttttgcaaacttgg
cttctctgtcctcagccgaattatgaagaaatacaacactggtacagcaattggaagtcg
ctgttctcggaacagctcatcagtttggacggtgtaagacggcagttcaattgtgctttg
gaaattatgaatcgcgccttgtccggtcagctcaccgccgatactgtaccacagttgaga
ttgcattcagctccatttaatcctaacttaatcaccgccgccgccgccccaccgtccact
atgtatttgccggtcaacatgaaagatattcttgaacaaaaagctgccgagatgagtttg
ttctttttacctttgaacaatcgttatcgtgaaggcaagccgatttatcgcttcggcacg
cagaccatttacattgatcggaatgtgattttttcacaagaaagcaacggcgattggcga
cccatttcactcggagagcttctaaccagtgcttttcagtaa
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