KEGG   Trichinella spiralis: Tsp_06230
Entry
Tsp_06230         CDS       T01609                                 
Name
(RefSeq) synaptobrevin protein
  KO
K08516  synaptobrevin homolog YKT6
Organism
tsp  Trichinella spiralis
Pathway
tsp04130  SNARE interactions in vesicular transport
tsp04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    Tsp_06230
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    Tsp_06230
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tsp04131]
    Tsp_06230
Membrane trafficking [BR:tsp04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    Tsp_06230
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 10908281
NCBI-ProteinID: XP_003378282
LinkDB
Position
Unknown
AA seq 207 aa
MKVFAIAVFYKSEPNAILLNGSFDLQSFSFFQRNSVRQFMVFTGKLIIDRSPIPNRTTVK
EQGYLCHVYIRADCLSGLVVTDEEYPSRVAHNLLSKVLEDFSAKVPPAVWKVDREPEHID
YNGLDSFLARYQDPRTADAMTRVQEELDETKIILHNTIQAVLERGEKLDDLVERSEEFCD
TLTVNWVSNGIVKNVQRSVQLCKYPIR
NT seq 624 nt   +upstreamnt  +downstreamnt
atgaaggtgtttgcaattgcagtgttttacaaatctgaaccaaacgctatcctgctgaat
ggaagctttgacctgcagtcgttcagctttttccaaaggaacagtgtacgtcagtttatg
gtgtttacaggaaaattgataattgatcgtagtccgattccaaatcgaactaccgtcaaa
gaacaaggctatttgtgccatgtttatattcgagcagactgtttgtctggtttggtggtt
accgatgaagaatatcccagtcgagtggcgcacaatcttctcagcaaagtacttgaagat
ttcagcgccaaagttccgcctgctgtgtggaaagttgatcgagaaccagaacatatagat
tataatggtttggactcttttcttgctagataccaggatcccagaactgccgatgccatg
acaagagtacaagaagagctggatgaaacaaaaattatattgcacaacaccattcaagca
gttttggaaagaggagagaagctggacgacttggtagaacgctctgaagagttttgtgat
acactgactgtaaactgggtttcgaatgggatagtcaaaaatgtacagagatcagtacag
ctatgtaaatatccaataagataa

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