Trichinella spiralis: Tsp_06233
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Entry
Tsp_06233 CDS
T01609
Name
(RefSeq) RNA-binding protein 5
KO
K13094
RNA-binding protein 5/10
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsp03041
]
Tsp_06233
Spliceosome [BR:
tsp03041
]
Complex A
Other components
Complex A specific factors
Tsp_06233
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
G-patch
OCRE
RRM_1
G-patch_2
DUF7066
SH3_YKFC_2nd
zf-C2H2_4
zf-C2H2
zf-C2H2_12
Motif
Other DBs
NCBI-GeneID:
10908278
NCBI-ProteinID:
XP_003378279
LinkDB
All DBs
Position
Unknown
AA seq
710 aa
AA seq
DB search
MSSDYRSKGYSGESSDRRLHAEHHNYDYAYDRRHRPRYRYANIEPNSTLVVKGIPLSYNE
ELVRNAVVEMGVTPIDVRILRRRESGESRGFGFIEFMSIEEATKYMERSQVKQMEMAFAL
QFNKITLTFRECEVVAMRDVNCCTTNNFKKRDHCFKCGVRREDSDPVCGDGINEIGVMPC
DTLLFRNLPYSLDEVKLTDHLNRTCAMTIQQVLIARNVENGFSRGYAYVQMTSVNDAAQL
LTTLTAVSKLIIDGRETDYTNAAAAVAQSAIKKAQVLRQAVTQVTSAALLESGAEYKLQN
TAVLMAGGGTQNEIGNLSKNVPSEESSVVVPQSSDVSLGTVDTAYGKLQRYPAPNVSQFQ
YDQTSGYYYDPTTGLYYDSNSQYFYNNTTQQFLYWDSSYQTYLPVVSSQGEDVGVGEESS
TTKDKKTAKPKQEKVKVAKKIQKDMEKWAKALNHRKEAVSTTSSSSSSSTKVVAAPEVEA
AAVAANLTISAGTADPEFQLDHHQVMVIQHGANVTTSDVENPPKKSTSVELNFLKEPDVD
WEKLVCLLCRRQFPTKDMLEKHQRLSEMHKSNLAEKQGKLNKSRQLSASSAGTTQYRDRA
SERRAKFGLDDQPHPNKLKEKFLESLECTAVATHKPAVESIGSRLMRNMGWKEGQGLGKS
NQGITNPIESERRVQGAGLGAPGSVYKANAGASYKEHVKAALRQKFFENR
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgattatcgcagtaaaggttatagtggcgaaagcagtgatcgtcgtttacat
gctgagcatcataattatgattatgcctatgatcgacgtcacaggccgagatatagatat
gccaacattgaaccaaatagtacacttgttgtaaaaggaattcctctaagctataacgaa
gaactggttcgaaatgcagttgttgaaatgggagtgacaccgatagatgtcagaatatta
cgaagaagagaatcaggcgaaagtcgtggatttgggtttattgaattcatgagtatagaa
gaagcaactaagtacatggaacgtagtcaggtaaagcaaatggaaatggcatttgctctt
cagttcaacaaaataactctaacatttagagaatgtgaagtagtagcaatgcgagatgtt
aactgctgcactacaaataacttcaagaaacgggatcactgtttcaagtgtggtgtcagg
agagaagattcagatccagtatgcggtgatggaattaatgagattggtgtcatgccctgt
gacactctgctatttcgaaatctaccctacagtcttgacgaagtgaaattgaccgatcac
ttgaatcggacatgtgcaatgaccattcagcaggtgctaattgccaggaacgtggagaat
ggtttctctaggggttacgcctacgtacaaatgacaagcgtaaatgatgccgcacaactg
cttacaacactgacggcagtttcaaaattgattattgatggacgagaaactgattacacc
aacgccgctgcagctgttgcgcagagtgctattaaaaaggcgcaagtattacggcaggca
gttacgcaggttaccagtgccgctttgctcgaaagtggtgcggaatataagcttcaaaat
acggctgtactgatggcaggaggaggtacgcaaaatgaaattggaaacttgtcgaaaaat
gtcccgtcagaagagtccagtgttgttgtaccccagtcgtcggatgtttcccttggaacg
gtggacactgcttacggaaaattgcaacgatatcctgccccaaatgtcagtcaatttcag
tatgatcaaaccagtggatattattacgatccaactactggtttgtattatgattcgaat
agccagtatttttacaacaatacaacgcagcagtttctttactgggatagtagttatcag
acgtatttgccggtagtgtcgtcgcagggtgaagatgttggcgttggggaagagtcgtcg
acaacgaaagacaagaaaactgccaagccgaagcaggaaaaagtgaaagtagccaaaaaa
atacagaaagatatggaaaaatgggcgaaggcgctgaatcatcgcaaggaggctgtttcg
acgacgtcatcgtcgtcgtcgtcttcgacgaaagttgttgctgcaccggaagtggaagcg
gcagcagtagcagctaatttgacaatatccgccggcacggcggatcctgaatttcagctt
gatcatcatcaggtgatggtgatacaacacggcgcgaatgtgaccactagtgacgtggaa
aatccgcctaaaaaatccacatccgtagaattgaattttttaaaggagccggacgtggac
tgggaaaaattggtctgtcttctgtgcaggaggcaatttccaaccaaagatatgttggaa
aaacatcaacggttgtccgaaatgcacaagagcaatttggcggaaaagcaaggaaagctt
aacaagtcgcggcagttgtctgccagctcggccggcactactcaataccgggatcgtgca
agtgaacgacgtgcgaaattcggcctggacgatcagccacacccaaacaaattgaaagag
aaattcttggaatctttggaatgcacagccgtggccactcacaagccagctgttgaaagc
attggctctagattgatgagaaatatgggctggaaagaaggacaaggattgggaaaatcc
aatcaaggcatcaccaatccaattgaatctgagaggcgtgtccaaggtgccggcttaggg
gctcctggttccgtttacaaagccaacgccggggccagttataaagagcacgtgaaagcg
gcactgcggcagaagtttttcgaaaatcgatga
DBGET
integrated database retrieval system
