KEGG   Trichinella spiralis: Tsp_06395
Entry
Tsp_06395         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K16743  abnormal spindle-like microcephaly-associated protein
Organism
tsp  Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tsp03036]
    Tsp_06395
Chromosome and associated proteins [BR:tsp03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    Tsp_06395
SSDB
Motif
Pfam: CH ASH CAMSAP_CH Ig_CFAP65_4th Cep192_D4 GSH-S_ATP HYDIN_VesB_CFA65-like_Ig IQ_SCN5A_C
Other DBs
NCBI-GeneID: 10908834
NCBI-ProteinID: XP_003378430
LinkDB
Position
Unknown
AA seq 1721 aa
MASYALYSPSQSPVRLELTHFSRTAILSFGSVTFGKTAQQSFLVVNNKQCDQQFFFDFSS
VNRTDISVDNEAALVPAKGEIECVVKWKPTETGNFRLSLPLKVTMFPSDEDEYVDVPIRY
WLRATLVGSCVLPQEISLKQKKLPLCMQRIPKTSAIKSNVKMGREFESEKLSARPNRIQA
NHNSQQSVRKDANFKLPFVEHVFTTFLNHLLTQDFITDDSNSEATQVNLKKIFSSSSANV
SPKAAAQRRVSLKQYAAVQQLNLLRLSASKAFCEVRSVVYRVCQAVEKGKILVRRDVAIH
RDQGIMRFITNLLLSVHPLWLRIGLEVVYSEIIQLHGDCTVRGLISFIRFRMLSDPELLK
QYGIAHVRNIYKNDYQPAISKFFLQKFLSLFIFLDFAKQKRLIKQDPCLFNPNSKYKTIR
DIFVVLNKEILSGEGNLFKTLAAVGYVPKYEQAWYDEKPLAIENLAVDLRDGLALTRLAA
MFTENPGLVTNLRGPPISRLQKLHNVQLALDNFMSANINIGDVDAASIVGGDRDKIMALL
WRLILHKVGLEFPDEVVQSPLMPEIISLRRSLRMKNSPEAKKMLNIKLHKKMTISELFIC
WLGCIAAHYDIEVDNLNLSLADGRVLCCTINYYLPSVLPVDVIKFETSMTTSRESFIPPN
ELKLNEKANHMLFQKSIREIGHVPDFFEFDRLQNLEYTDERVWILCLNSLATVLFALRRE
QQAACIIQKAWKTYLRKNCQQAVEMHEYSNVDHFNEHLLVQNEQLKIEEKENSIGGEMPF
DEKEQGETCAVAVVDENDKMESGDNLSMEIETLIEFQACCRRKLVLNNFLQQYKSDSGNE
CETSDEEECAKELSNAQSDQNADAFECMTRSEVVQQQNHVYGINVKSNSSLLDANECKVE
NSYAVHDAKDESSLFENNIINLNRNQSVIANESVCLLETNVAAHKQNELMEPTLGDQKPE
FQSGTLPAVDEVKSISLADIPRIVIEECCSPAETTASILSSSTSALKYSGSSGRGFAELD
AVNEAECPAPSLLIEKLPKFSDMLEMFEFRPFEEKRYSPLNFDERQQPLYRSTKVLSLSN
ENFEDFSDDSGQSSAALLCSDGASSADVRRESNITVSSENLLNMQMSWNCNYEQTDRTGA
DSKPSNDEVIAFNEPGNVDVDTDGTDLCMGPTELLFCSDRCDQNFIPLKTDKSVSLMEAV
DNLKHLTEIPRESFPANQTSMNNMAEDCLSPPQFGSLTKTPKFDSTIVGENAAEVNVEFQ
NLASAKSPHHQTACTSLISAYLQGDFKKTRESAVNFNELLEYSPINSYFDTSKLHAKCSS
TEYATEDADAAVQVEPTARSSECGSSPENSEKKLNNTESSNLSDKDSEDFVIKEIRDYFE
TPSLKSMRSAIEVDSKFQMTPYIAECERLANRNDSLSFNFLKFSSIDFETPIQNRLHNSS
FNYSGRTTLTTNILNASTRNIFEEIMSAEAKEKNKSNGIIRRIPCLTLQQNVMDSIIEQA
NCLDTELPVLQNDTLLHKNTNSNVVTQHDEISNLLKTIVESDRLVCIENAVLRLNELSEE
SEDMCKRMVQLDAAEKLLALVNRLNRSFNSSIIIDIVMKCLKQITSHQSTMKSVTESADW
FQSLAWQLIYFKDTKPSDTFCNIVAIFCQLSVLDVAQAAFQENLQFVTRFEQIRKHISKR
HEWLVKKYESVSSDLSENLPLKDSAQRLEALKALYSCYELL
NT seq 5166 nt   +upstreamnt  +downstreamnt
atggcatcgtatgctttgtacagtccgtcgcaatcgcccgttcgtcttgaacttactcat
ttttctcggactgctattttgagttttggatcggtcacttttggtaaaacagcccaacag
tcgtttcttgtcgtcaacaacaaacagtgtgaccaacagtttttcttcgacttttcatca
gtgaacagaactgacattagtgttgataatgaagcagcgcttgttcctgcgaaaggcgaa
attgagtgcgtggttaaatggaagcccacagagacgggaaattttcgactctctcttcct
ttgaaagtgacaatgttcccatccgacgaagatgaatacgtggatgtgccgatccgctat
tggttacgagccactttggttggtagttgtgttttgcctcaagagatttcgctcaagcag
aagaaactgcctctgtgtatgcaacgaattccaaagacaagtgcgataaagtcaaacgta
aaaatgggacgtgagtttgaatcagagaaacttagcgcaaggccaaacagaattcaagca
aatcataattctcagcagtcggttcgtaaggatgcaaattttaagcttcctttcgtggaa
catgtgtttacaacatttttgaatcatcttttgacccaagatttcattacggacgattct
aacagcgaagcaacgcaagtaaacttgaaaaaaattttttcttcatcgtcagcaaatgtc
tcgccgaaagctgctgctcaacgtagagtttctttgaagcaatacgcggctgttcaacaa
ttaaatttgcttcgtttgagcgctagcaaagctttttgtgaagtcaggtcagtggtttat
cgagtatgtcaagctgttgagaaaggcaaaattctggttcgtcgtgatgttgccatccat
cgtgatcaaggaataatgagattcatcaccaatctattgctgtctgtacatccgttatgg
cttcgtattggtctggaagttgtgtattcagaaattattcaattgcatggcgactgcaca
gttcgtggtttgatcagttttattcgcttccgtatgctgagcgatcccgagctacttaag
caatacggtattgctcatgtgcgcaacatctacaagaatgattatcaacctgcgattagt
aaatttttcttgcaaaaatttctgtccttatttatttttcttgatttcgccaagcaaaag
cgattgattaagcaagatccttgtctgtttaatcccaattccaaatataagacaattagg
gacattttcgtggtgttgaataaggaaattttgagtggcgaaggaaacttgttcaaaact
ttagctgctgtgggttacgtgccgaaatacgagcaagcatggtacgatgaaaagccactg
gctatagaaaatcttgccgtagatttgagagatggacttgctcttacgcgacttgccgca
atgtttacggaaaatcctggtttagttaccaacttgcgcggtcctccaattagccgactt
cagaaattacacaatgtccaattggctttggataacttcatgtcggccaatatcaatatt
ggagatgtcgatgccgcgtccattgtgggaggagatcgtgacaaaataatggctctgctg
tggagattaattttgcacaaagtgggtttggaatttccggatgaagtggttcaatcgcca
ctgatgccggaaattatttctctgaggaggagccttcgaatgaaaaattcccctgaagcg
aagaaaatgctgaacataaagctgcacaaaaagatgaccatttcggaacttttcatttgc
tggcttggttgcattgctgcacactacgacatagaggttgataatttaaatttatcactt
gctgatggtcgagttttgtgctgcaccataaattattatttgccttctgtactgccggta
gatgtgatcaaatttgagacgagcatgactacgtcgagagaatctttcattccgccgaat
gaattgaaattaaacgaaaaagcaaatcacatgttgtttcaaaaatcaattcgtgaaatt
ggacacgtgccagattttttcgaatttgatcgtctgcaaaatttggaatacaccgatgag
cgggtttggatattgtgcttgaacagtctggctacggttttgttcgccttgcgccgagag
caacaagctgcttgtattattcaaaaagcgtggaaaacgtatcttcgtaaaaattgtcaa
caagcggttgaaatgcatgaatattcaaatgtggatcatttcaacgagcatcttctcgtt
caaaatgaacaattgaaaattgaagaaaaggagaattccattggaggtgaaatgccattt
gatgagaaagaacaaggtgaaacttgtgcagttgctgttgtggatgaaaatgataaaatg
gaaagtggtgataatttatcaatggaaattgaaacgttgatcgaatttcaagcttgctgt
agaaggaaattggttttgaataattttcttcaacaatacaaatcggatagtggaaatgaa
tgtgaaacatccgatgaagaagaatgtgccaaagaactttcgaatgctcaaagtgaccag
aacgcagacgcatttgaatgtatgaccagatcggaagttgtccaacagcaaaatcacgtt
tatggcattaatgtcaaatccaattcatcattgcttgatgcgaatgaatgcaaagttgaa
aattcatatgctgtgcatgatgcgaaagatgaatcgtctttgtttgagaataacattatc
aatttgaacagaaatcaatctgttattgctaatgaatcagtttgtttattggaaaccaat
gttgcagcgcataagcagaatgaattgatggaaccaactttgggtgaccaaaagccagaa
ttccagtctggaacactgcccgcggtagatgaagtgaaaagtatcagtttggcggatatt
ccacggattgttattgaagagtgttgttcaccggcagaaactaccgcttcaattttgtcc
agttcaacgtctgcactgaagtacagtggttcaagtggaagaggatttgccgaattggac
gctgtgaacgaagcagaatgtccagcgccgtctttgttaatagaaaagttacccaagttt
tctgatatgttggaaatgtttgaatttcgtccatttgaagaaaaacgttattcaccattg
aattttgatgaacggcaacagccactttacagaagcaccaaagttctgtcattgtcgaat
gaaaattttgaagatttttcagacgactctggtcaaagttcggctgcattattatgcagt
gatggtgcttcttcggctgacgtgcgacgtgaaagcaatattactgttagttctgaaaat
ttgctaaatatgcaaatgtcatggaattgcaattatgagcagactgatcggactggagcg
gattcgaaaccatccaacgatgaagttattgcattcaacgagccaggcaacgtcgatgtt
gatacggatggtactgatctatgcatgggaccgactgaattgttgttctgttcagatcgt
tgtgatcagaattttatccctttgaaaaccgacaagtcggtgtctctaatggaggcagtt
gacaatttgaaacatttaactgaaattccacgggaatcatttcctgcaaatcagacttca
atgaataacatggcggaggactgtttgtcgccaccacagtttggcagtttgacaaaaacg
ccgaaatttgattctacaattgttggtgaaaatgcagctgaagtgaatgttgaatttcag
aatttggcatcagcaaaatcaccccaccatcagacagcatgtacttctttgatttctgca
tatctgcagggtgattttaagaagacgcgtgaatcagccgtcaactttaacgaacttttg
gaatattctccaataaacagttactttgacacatcaaaattgcatgcaaaatgttcatcg
acggaatatgccactgaagatgcagatgcggctgtgcaggttgaaccaacagcacgttcg
tctgaatgtggttcgtcgcctgaaaattcagagaaaaaattgaataacacagaatcgagc
aacctttcagacaaggatagtgaagatttcgtaataaaagaaatcagagattatttcgaa
acgccatcgttgaaatcaatgcgcagtgctattgaagtggacagcaaatttcagatgaca
ccgtacatagctgaatgcgaacgtctggccaatagaaatgactctttgtcattcaatttt
ttgaaattctcctccattgacttcgaaacaccgatacagaaccgtcttcacaatagctcg
ttcaactattccggtagaactactcttacaacaaatatactgaatgcatctacgagaaac
attttcgaagaaattatgagtgcagaggcgaaggagaaaaataaatcgaatggaatcata
cgacgaatcccttgtttgacactgcagcagaatgttatggattcaataattgaacaagcg
aactgtttggacactgagttgccggtattgcaaaatgacacgctgttgcataagaataca
aattcgaatgttgtaacacagcatgatgaaatttcaaatctgttgaaaacaattgtagaa
agtgatcgtctggtttgcatagagaatgcggtgttacgtcttaatgagttgagcgaagaa
tctgaagatatgtgcaaaaggatggtacagttggatgcggctgagaaattgttagctttg
gtgaacaggttgaatcgatctttcaattcatcgataattattgatattgttatgaaatgc
ttgaaacagatcacttcgcaccaaagcacaatgaagagtgtcaccgagagtgctgattgg
tttcagagtttggcttggcagttgatttatttcaaagataccaaaccaagcgatacgttt
tgcaatattgttgctattttttgccagctgtccgttcttgacgtagctcaagctgctttt
caagaaaatttacagttcgtgaccagatttgagcagattcgcaaacacatttcaaaacgt
cacgaatggctagtgaaaaagtatgagtctgtttcaagcgatttatctgaaaatttgcca
ctgaaagattcagcacagcggcttgaagctctgaaagctttgtacagctgttatgaactt
ttataa

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