Trichinella spiralis: Tsp_06395
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Entry
Tsp_06395 CDS
T01609
Name
(RefSeq) hypothetical protein
KO
K16743
abnormal spindle-like microcephaly-associated protein
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_06395
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
Tsp_06395
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CH
ASH
CAMSAP_CH
Ig_CFAP65_4th
Cep192_D4
GSH-S_ATP
HYDIN_VesB_CFA65-like_Ig
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
10908834
NCBI-ProteinID:
XP_003378430
LinkDB
All DBs
Position
Unknown
AA seq
1721 aa
AA seq
DB search
MASYALYSPSQSPVRLELTHFSRTAILSFGSVTFGKTAQQSFLVVNNKQCDQQFFFDFSS
VNRTDISVDNEAALVPAKGEIECVVKWKPTETGNFRLSLPLKVTMFPSDEDEYVDVPIRY
WLRATLVGSCVLPQEISLKQKKLPLCMQRIPKTSAIKSNVKMGREFESEKLSARPNRIQA
NHNSQQSVRKDANFKLPFVEHVFTTFLNHLLTQDFITDDSNSEATQVNLKKIFSSSSANV
SPKAAAQRRVSLKQYAAVQQLNLLRLSASKAFCEVRSVVYRVCQAVEKGKILVRRDVAIH
RDQGIMRFITNLLLSVHPLWLRIGLEVVYSEIIQLHGDCTVRGLISFIRFRMLSDPELLK
QYGIAHVRNIYKNDYQPAISKFFLQKFLSLFIFLDFAKQKRLIKQDPCLFNPNSKYKTIR
DIFVVLNKEILSGEGNLFKTLAAVGYVPKYEQAWYDEKPLAIENLAVDLRDGLALTRLAA
MFTENPGLVTNLRGPPISRLQKLHNVQLALDNFMSANINIGDVDAASIVGGDRDKIMALL
WRLILHKVGLEFPDEVVQSPLMPEIISLRRSLRMKNSPEAKKMLNIKLHKKMTISELFIC
WLGCIAAHYDIEVDNLNLSLADGRVLCCTINYYLPSVLPVDVIKFETSMTTSRESFIPPN
ELKLNEKANHMLFQKSIREIGHVPDFFEFDRLQNLEYTDERVWILCLNSLATVLFALRRE
QQAACIIQKAWKTYLRKNCQQAVEMHEYSNVDHFNEHLLVQNEQLKIEEKENSIGGEMPF
DEKEQGETCAVAVVDENDKMESGDNLSMEIETLIEFQACCRRKLVLNNFLQQYKSDSGNE
CETSDEEECAKELSNAQSDQNADAFECMTRSEVVQQQNHVYGINVKSNSSLLDANECKVE
NSYAVHDAKDESSLFENNIINLNRNQSVIANESVCLLETNVAAHKQNELMEPTLGDQKPE
FQSGTLPAVDEVKSISLADIPRIVIEECCSPAETTASILSSSTSALKYSGSSGRGFAELD
AVNEAECPAPSLLIEKLPKFSDMLEMFEFRPFEEKRYSPLNFDERQQPLYRSTKVLSLSN
ENFEDFSDDSGQSSAALLCSDGASSADVRRESNITVSSENLLNMQMSWNCNYEQTDRTGA
DSKPSNDEVIAFNEPGNVDVDTDGTDLCMGPTELLFCSDRCDQNFIPLKTDKSVSLMEAV
DNLKHLTEIPRESFPANQTSMNNMAEDCLSPPQFGSLTKTPKFDSTIVGENAAEVNVEFQ
NLASAKSPHHQTACTSLISAYLQGDFKKTRESAVNFNELLEYSPINSYFDTSKLHAKCSS
TEYATEDADAAVQVEPTARSSECGSSPENSEKKLNNTESSNLSDKDSEDFVIKEIRDYFE
TPSLKSMRSAIEVDSKFQMTPYIAECERLANRNDSLSFNFLKFSSIDFETPIQNRLHNSS
FNYSGRTTLTTNILNASTRNIFEEIMSAEAKEKNKSNGIIRRIPCLTLQQNVMDSIIEQA
NCLDTELPVLQNDTLLHKNTNSNVVTQHDEISNLLKTIVESDRLVCIENAVLRLNELSEE
SEDMCKRMVQLDAAEKLLALVNRLNRSFNSSIIIDIVMKCLKQITSHQSTMKSVTESADW
FQSLAWQLIYFKDTKPSDTFCNIVAIFCQLSVLDVAQAAFQENLQFVTRFEQIRKHISKR
HEWLVKKYESVSSDLSENLPLKDSAQRLEALKALYSCYELL
NT seq
5166 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgtatgctttgtacagtccgtcgcaatcgcccgttcgtcttgaacttactcat
ttttctcggactgctattttgagttttggatcggtcacttttggtaaaacagcccaacag
tcgtttcttgtcgtcaacaacaaacagtgtgaccaacagtttttcttcgacttttcatca
gtgaacagaactgacattagtgttgataatgaagcagcgcttgttcctgcgaaaggcgaa
attgagtgcgtggttaaatggaagcccacagagacgggaaattttcgactctctcttcct
ttgaaagtgacaatgttcccatccgacgaagatgaatacgtggatgtgccgatccgctat
tggttacgagccactttggttggtagttgtgttttgcctcaagagatttcgctcaagcag
aagaaactgcctctgtgtatgcaacgaattccaaagacaagtgcgataaagtcaaacgta
aaaatgggacgtgagtttgaatcagagaaacttagcgcaaggccaaacagaattcaagca
aatcataattctcagcagtcggttcgtaaggatgcaaattttaagcttcctttcgtggaa
catgtgtttacaacatttttgaatcatcttttgacccaagatttcattacggacgattct
aacagcgaagcaacgcaagtaaacttgaaaaaaattttttcttcatcgtcagcaaatgtc
tcgccgaaagctgctgctcaacgtagagtttctttgaagcaatacgcggctgttcaacaa
ttaaatttgcttcgtttgagcgctagcaaagctttttgtgaagtcaggtcagtggtttat
cgagtatgtcaagctgttgagaaaggcaaaattctggttcgtcgtgatgttgccatccat
cgtgatcaaggaataatgagattcatcaccaatctattgctgtctgtacatccgttatgg
cttcgtattggtctggaagttgtgtattcagaaattattcaattgcatggcgactgcaca
gttcgtggtttgatcagttttattcgcttccgtatgctgagcgatcccgagctacttaag
caatacggtattgctcatgtgcgcaacatctacaagaatgattatcaacctgcgattagt
aaatttttcttgcaaaaatttctgtccttatttatttttcttgatttcgccaagcaaaag
cgattgattaagcaagatccttgtctgtttaatcccaattccaaatataagacaattagg
gacattttcgtggtgttgaataaggaaattttgagtggcgaaggaaacttgttcaaaact
ttagctgctgtgggttacgtgccgaaatacgagcaagcatggtacgatgaaaagccactg
gctatagaaaatcttgccgtagatttgagagatggacttgctcttacgcgacttgccgca
atgtttacggaaaatcctggtttagttaccaacttgcgcggtcctccaattagccgactt
cagaaattacacaatgtccaattggctttggataacttcatgtcggccaatatcaatatt
ggagatgtcgatgccgcgtccattgtgggaggagatcgtgacaaaataatggctctgctg
tggagattaattttgcacaaagtgggtttggaatttccggatgaagtggttcaatcgcca
ctgatgccggaaattatttctctgaggaggagccttcgaatgaaaaattcccctgaagcg
aagaaaatgctgaacataaagctgcacaaaaagatgaccatttcggaacttttcatttgc
tggcttggttgcattgctgcacactacgacatagaggttgataatttaaatttatcactt
gctgatggtcgagttttgtgctgcaccataaattattatttgccttctgtactgccggta
gatgtgatcaaatttgagacgagcatgactacgtcgagagaatctttcattccgccgaat
gaattgaaattaaacgaaaaagcaaatcacatgttgtttcaaaaatcaattcgtgaaatt
ggacacgtgccagattttttcgaatttgatcgtctgcaaaatttggaatacaccgatgag
cgggtttggatattgtgcttgaacagtctggctacggttttgttcgccttgcgccgagag
caacaagctgcttgtattattcaaaaagcgtggaaaacgtatcttcgtaaaaattgtcaa
caagcggttgaaatgcatgaatattcaaatgtggatcatttcaacgagcatcttctcgtt
caaaatgaacaattgaaaattgaagaaaaggagaattccattggaggtgaaatgccattt
gatgagaaagaacaaggtgaaacttgtgcagttgctgttgtggatgaaaatgataaaatg
gaaagtggtgataatttatcaatggaaattgaaacgttgatcgaatttcaagcttgctgt
agaaggaaattggttttgaataattttcttcaacaatacaaatcggatagtggaaatgaa
tgtgaaacatccgatgaagaagaatgtgccaaagaactttcgaatgctcaaagtgaccag
aacgcagacgcatttgaatgtatgaccagatcggaagttgtccaacagcaaaatcacgtt
tatggcattaatgtcaaatccaattcatcattgcttgatgcgaatgaatgcaaagttgaa
aattcatatgctgtgcatgatgcgaaagatgaatcgtctttgtttgagaataacattatc
aatttgaacagaaatcaatctgttattgctaatgaatcagtttgtttattggaaaccaat
gttgcagcgcataagcagaatgaattgatggaaccaactttgggtgaccaaaagccagaa
ttccagtctggaacactgcccgcggtagatgaagtgaaaagtatcagtttggcggatatt
ccacggattgttattgaagagtgttgttcaccggcagaaactaccgcttcaattttgtcc
agttcaacgtctgcactgaagtacagtggttcaagtggaagaggatttgccgaattggac
gctgtgaacgaagcagaatgtccagcgccgtctttgttaatagaaaagttacccaagttt
tctgatatgttggaaatgtttgaatttcgtccatttgaagaaaaacgttattcaccattg
aattttgatgaacggcaacagccactttacagaagcaccaaagttctgtcattgtcgaat
gaaaattttgaagatttttcagacgactctggtcaaagttcggctgcattattatgcagt
gatggtgcttcttcggctgacgtgcgacgtgaaagcaatattactgttagttctgaaaat
ttgctaaatatgcaaatgtcatggaattgcaattatgagcagactgatcggactggagcg
gattcgaaaccatccaacgatgaagttattgcattcaacgagccaggcaacgtcgatgtt
gatacggatggtactgatctatgcatgggaccgactgaattgttgttctgttcagatcgt
tgtgatcagaattttatccctttgaaaaccgacaagtcggtgtctctaatggaggcagtt
gacaatttgaaacatttaactgaaattccacgggaatcatttcctgcaaatcagacttca
atgaataacatggcggaggactgtttgtcgccaccacagtttggcagtttgacaaaaacg
ccgaaatttgattctacaattgttggtgaaaatgcagctgaagtgaatgttgaatttcag
aatttggcatcagcaaaatcaccccaccatcagacagcatgtacttctttgatttctgca
tatctgcagggtgattttaagaagacgcgtgaatcagccgtcaactttaacgaacttttg
gaatattctccaataaacagttactttgacacatcaaaattgcatgcaaaatgttcatcg
acggaatatgccactgaagatgcagatgcggctgtgcaggttgaaccaacagcacgttcg
tctgaatgtggttcgtcgcctgaaaattcagagaaaaaattgaataacacagaatcgagc
aacctttcagacaaggatagtgaagatttcgtaataaaagaaatcagagattatttcgaa
acgccatcgttgaaatcaatgcgcagtgctattgaagtggacagcaaatttcagatgaca
ccgtacatagctgaatgcgaacgtctggccaatagaaatgactctttgtcattcaatttt
ttgaaattctcctccattgacttcgaaacaccgatacagaaccgtcttcacaatagctcg
ttcaactattccggtagaactactcttacaacaaatatactgaatgcatctacgagaaac
attttcgaagaaattatgagtgcagaggcgaaggagaaaaataaatcgaatggaatcata
cgacgaatcccttgtttgacactgcagcagaatgttatggattcaataattgaacaagcg
aactgtttggacactgagttgccggtattgcaaaatgacacgctgttgcataagaataca
aattcgaatgttgtaacacagcatgatgaaatttcaaatctgttgaaaacaattgtagaa
agtgatcgtctggtttgcatagagaatgcggtgttacgtcttaatgagttgagcgaagaa
tctgaagatatgtgcaaaaggatggtacagttggatgcggctgagaaattgttagctttg
gtgaacaggttgaatcgatctttcaattcatcgataattattgatattgttatgaaatgc
ttgaaacagatcacttcgcaccaaagcacaatgaagagtgtcaccgagagtgctgattgg
tttcagagtttggcttggcagttgatttatttcaaagataccaaaccaagcgatacgttt
tgcaatattgttgctattttttgccagctgtccgttcttgacgtagctcaagctgctttt
caagaaaatttacagttcgtgaccagatttgagcagattcgcaaacacatttcaaaacgt
cacgaatggctagtgaaaaagtatgagtctgtttcaagcgatttatctgaaaatttgcca
ctgaaagattcagcacagcggcttgaagctctgaaagctttgtacagctgttatgaactt
ttataa
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