Trichinella spiralis: Tsp_06558
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Entry
Tsp_06558 CDS
T01609
Name
(RefSeq) deoxyribonuclease II family protein
KO
K01158
deoxyribonuclease II [EC:
3.1.22.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Tsp_06558
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.22 Endodeoxyribonucleases producing 3'-phosphomonoesters
3.1.22.1 deoxyribonuclease II
Tsp_06558
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNase_II
Big_11
Motif
Other DBs
NCBI-GeneID:
10909852
NCBI-ProteinID:
XP_003378712
LinkDB
All DBs
Position
Unknown
AA seq
347 aa
AA seq
DB search
MFIFYVIALYTLQLGVTPIDYQCKEQNNDVDWFFVYKLPGGKSSHHLLPTAATDWSAAAD
IDAQQQPIHSTMNIYIGSQNKPNTNIVAYSNYPPHFKFELPMSPGKGVIMAEDNNKGFWL
VHTAKYFPNLALAIGDLFSNEKTTKEAAAFLCMSYSDVNLRAIAKIIDYEQPIVFFAQKS
ATVPAFYDSTEIQRLVNGLHTYQPTASASGDGVATLTAPGTVKIFASAPVAYSSDIYLNY
IVKIMQKSFQVYTPGTTATVLRKSCAGTLKVENVLGPITVKDTVIPIGQDSARWSVPKSD
SDFICLSNTGRTANDAKYGASVACVLSKEAADLFRKMITTKNLDACT
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgttcatattttatgttatagctctatataccttgcagttaggtgtaacacccattgat
taccaatgcaaagaacaaaataatgatgtggattggttctttgtctataaattgccagga
gggaaatcttcacatcatcttctaccaactgctgcaacagactggtcagctgcagcagat
atagatgcccaacagcaaccaattcattctacaatgaatatttatattggttcacaaaac
aagcccaatacaaatattgtagcatacagcaattatcctccacattttaaatttgaactt
cccatgagtcctggaaaaggtgtaataatggctgaagataataataaaggattttggttg
gtacacacagcaaagtattttccaaatttagcacttgctataggagatctattttcgaat
gaaaagaccacaaaggaagcagctgcatttttatgcatgtcatattctgatgtcaatttg
agggctattgcaaaaataatcgattatgaacaacccatcgtattttttgctcagaaatct
gcaacagtacccgctttctatgattcaactgaaattcaaagactcgttaatggcttgcat
acatatcagccaactgcatctgcttctggtgatggcgtagcgactttgactgcaccagga
actgtgaaaatatttgcatcagcaccagtagcatattcatcggatatatatttgaattat
atcgttaaaattatgcaaaaatccttccaagtttacacacctggaacaactgcaactgtt
ttgagaaaatcatgcgctggcacattaaaagtggaaaacgtattagggccaataactgtt
aaagacactgtaattccaataggacaagacagtgcaagatggtctgttccgaaatcagat
tctgatttcatatgcttaagcaatactggaagaacggcgaatgatgcaaaatatggagca
agcgttgcttgcgttttgagcaaagaagcagctgacttattcagaaagatgatcaccacg
aagaacttggatgcatgcacctaa
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