Trichinella spiralis: Tsp_06568
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Entry
Tsp_06568 CDS
T01609
Name
(RefSeq) deoxyribonuclease II family protein
KO
K01158
deoxyribonuclease II [EC:
3.1.22.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Tsp_06568
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.22 Endodeoxyribonucleases producing 3'-phosphomonoesters
3.1.22.1 deoxyribonuclease II
Tsp_06568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNase_II
Big_11
PKcGMP_CC
Motif
Other DBs
NCBI-GeneID:
10909842
NCBI-ProteinID:
XP_003378702
LinkDB
All DBs
Position
Unknown
AA seq
348 aa
AA seq
DB search
MFIFFVIALYTLQLRVTSVEYQCIENANNVDWFFVYKLPGGKSSHYLKPGDADWAALADI
DAAQQPIHSTMNTYFNSGNKDNANIILYSNYPPHFKFELPMSPGKGVIMAEDANKGFWLV
HTAKYFPNLAGAIGDLFSNEKTTNDAAAFLCMTYSDVNLRAIAKIIDYEQPIVYFTQRSA
AAAAQPFYDSTEIQKLVNGLHKYQPTASVSGDGVATLTPPGTVKIFASAPVGYSSDIYSN
YIVKRLEKSMQVYTPGTTTTVLRKTCTGTLKVENVLGPITVKDTVIPIGQDSARWSVPKS
DSDFICLSNTGRTTNDAKYGATVACVLSKEAAALFRNMIKKENLDACQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgttcatattttttgttatagctctgtataccttgcagttacgtgtaacatccgttgaa
taccaatgcattgaaaatgctaataatgtagattggttctttgtttataaactgccagga
ggaaaatcttcacattatcttaaaccaggtgatgcagactgggcagctcttgcagatata
gatgccgcacagcaaccaattcattctacgatgaatacgtattttaattcaggaaataag
gataatgcaaatataatactatacagtaattatcctccgcattttaaatttgaacttccc
atgagtcctggaaaaggagtaataatggctgaagatgcaaataagggattttggttggta
cacacagcaaagtattttccaaatttagcaggtgctataggagatctattttcaaatgag
aagaccactaatgacgcagctgcttttttatgcatgacatattctgatgtcaatttgagg
gctattgcaaaaataattgattatgaacaacccatcgtatattttactcagagatcggca
gcagcagccgcccagccattctacgattcaactgaaattcaaaaacttgtaaatggattg
cataagtatcagccaactgcatctgtttctggtgatggcgtagcgactttgactccacca
ggaactgtgaaaatatttgcatcagcaccagtaggatattcatcagatatatattcaaat
tatattgttaaacgtctagaaaaatccatgcaagtttacacacctggaacaactacaact
gttttgagaaaaacatgcactggcacattgaaagtggaaaacgtattagggccaataact
gttaaagatactgtaattccaataggacaagacagtgcaagatggtctgttccgaaatca
gattctgatttcatatgcttaagcaatactggaagaacgacgaatgatgcaaaatatgga
gcaacagtcgcttgtgttttgagcaaagaagcggcggctttgttcagaaacatgataaag
aaagaaaacttggatgcatgccaataa
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