Trichinella spiralis: Tsp_06591
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Entry
Tsp_06591 CDS
T01609
Name
(RefSeq) syntaxin-16
KO
K08489
syntaxin 16
Organism
tsp
Trichinella spiralis
Pathway
tsp04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
Tsp_06591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_06591
Membrane trafficking [BR:
tsp04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
Tsp_06591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syntaxin
GPS2_interact
ACCA
OmpH
Motif
Other DBs
NCBI-GeneID:
10909819
NCBI-ProteinID:
XP_003378679
UniProt:
E5SGJ0
LinkDB
All DBs
Position
Unknown
AA seq
386 aa
AA seq
DB search
MGHLENFPRLGIVRSLTDIYITLRNNAVQSRHIFHDNVSRKSEDRMTLIPLHDSSVETSI
PMSDFREPPEWIHIVDEIQFEMSKISTQINELKSLQQRHVSRPSFSDEISQEEQNIENLT
GEITHQLNHVQSLLQLVTRSRSEGTAERFRANVVLAHVQALQTLTSDFQRSQSEYLRQIQ
SRESSYQKYFESYISSDVGDICLPDFQNADIGDLATASSATTTGAEPTMSELQLLEQSTV
LVKEREREIMHVTRSIVELNQLFRDLATYISDQGTVLDRIDYNVEKSAPPCASCSSSSWP
LSSLHLSYTVAPCALVLHTASRSAASIPCSLCHRHNNPKNTNTSAFVIYANILDLNYPAF
RQLLLESSSVLNQSFSQEQWMLLIYF
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggccatttggagaattttccgcgattgggaattgttcgtagtttgacagatatttat
atcaccttgcgtaacaatgcagttcaaagtcgtcatatatttcacgataatgtcagcagg
aaaagtgaagatcgtatgacgttgattccattgcatgattcatcggtggagaccagtatt
ccaatgtcagatttccgagaaccacccgagtggattcatattgttgatgaaattcaattt
gaaatgagcaaaataagcactcagatcaacgaattgaaatcacttcaacagcggcatgtt
tcgcgaccgtcattcagtgatgaaatttcacaagaagaacaaaatattgagaatctgacg
ggagagattacacatcagcttaatcatgtccaaagtcttttacaattggtgacgcgttct
cgaagcgaaggcactgccgaacgttttcgagctaatgtcgttcttgctcatgtacaagct
ttacagacattgacgagcgattttcaacgtagtcaatccgaatatttgagacaaatacaa
agccgggaaagcagttatcagaaatatttcgaatcttacatcagttccgatgtcggtgat
atttgtttgccggatttccaaaatgcggatattggtgatttggcaacagcatcatcagca
acgacaacaggagctgagccgacaatgagcgaactgcaacttctcgaacagagcacagtt
ttggtgaaagaacgagaacgggaaataatgcacgtcacacgttccattgttgaattgaat
caattgttccgtgatttggccacttatatctcggatcaaggtactgtattggacaggatc
gattacaatgttgaaaaatctgcgccgccttgtgcatcttgctcatcatcatcatggcca
ttgtcaagtcttcatttgtcatatactgttgcaccatgtgcactcgtcttgcacactgcg
tcacgcagtgctgcatcgattccatgctcgctttgccatcgtcacaacaatccgaagaac
acaaatacatctgcttttgtaatttacgcaaatattctcgatctaaactatccagcattt
cgtcagttgcttcttgaatcttcttctgtattgaatcagtcattttcacaagagcagtgg
atgctattgatttatttttaa
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integrated database retrieval system