KEGG   Trichinella spiralis: Tsp_06813
Entry
Tsp_06813         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
tsp  Trichinella spiralis
Pathway
tsp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    Tsp_06813
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tsp03041]
    Tsp_06813
Spliceosome [BR:tsp03041]
 Complex A
  U2 snRNP components
   U2 related factors
    Tsp_06813
 Complex B
    Tsp_06813
SSDB
Motif
Pfam: zf-CCCH RRM_1 Torus zf_CCCH_4
Other DBs
NCBI-GeneID: 10912004
NCBI-ProteinID: XP_003380657
LinkDB
Position
Unknown
AA seq 254 aa
MAEYLASIFGTEKDKVNCSFYFKIGACRHGDKCSRIHNRPTFSQTILLQNLYQNPKMDIH
RAEAALFCCQFGRDVIGRPSTGALGELWWVMVGVTDSHEQQHFDEFFEEIFDEVEDKYGE
IEEMNVCDNIGEHMIGNVYIKFKREEDAERAVKDLNTRWFGGMPIYAELSPVTDFREACC
RQYEMGDCGKGGFCNFMHLKPISRELRRRLYGRRKRAGNGYICYYDFRFSSFDRFPERRR
SRSRGRERDRRSRY
NT seq 765 nt   +upstreamnt  +downstreamnt
atggcagagtatttggcttcgatatttggaactgaaaaggataaggttaactgttcgttt
tactttaaaataggggcttgccgtcatggtgataagtgttcgcgtattcataacaggcca
acatttagtcaaactatccttttgcaaaatctttatcaaaatccgaaaatggacattcat
cgcgcagaagctgcattattttgctgccaatttggacgcgatgtaattggacgtccatca
acaggagctttaggtgaactgtggtgggttatggtaggagtgacggattctcacgaacag
cagcattttgatgaattttttgaagaaatttttgatgaagttgaagataagtatggcgaa
atagaagagatgaacgtatgtgataacataggagagcacatgattggaaatgtttatata
aaatttaaacgcgaagaagatgctgaaagagcagtgaaagatttaaacactcgttggttt
ggtggaatgcccatttatgcggaactttcaccagtaactgattttcgagaagcatgctgt
cgtcagtacgaaatgggtgattgtggcaagggaggattttgcaattttatgcatttgaaa
ccaattagtcgcgagttgcgccgtcgtctttatggtcgccgaaaaagagcaggaaatggt
tatatttgttactatgatttcagattttcatcatttgatcgctttccggaaagacgccgc
tctcgaagtcgtggccgtgaacgagatcgtcgctcaagatattga

DBGET integrated database retrieval system