Trichinella spiralis: Tsp_06918
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Entry
Tsp_06918 CDS
T01609
Name
(RefSeq) putative tetratricopeptide repeat-containing domain protein
KO
K03355
anaphase-promoting complex subunit 8
Organism
tsp
Trichinella spiralis
Pathway
tsp04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
Tsp_06918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tsp04121
]
Tsp_06918
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_06918
Ubiquitin system [BR:
tsp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Other subunits
Tsp_06918
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
Tsp_06918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC8
TPR_2
TPR_17
TPR_1
TPR_14
TPR_8
TPR_11
TPR_CcmH_CycH
TPR_16
TPR_19
ANAPC3
Motif
Other DBs
NCBI-GeneID:
10912196
NCBI-ProteinID:
XP_003380768
UniProt:
E5S6G7
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MASDVAIKGDEVQDFRLPSDETFIHDMWLTYCDCQERRLLEYSYLLIETAVSFNSELQQV
QLPKTEYSSLPIQDRISIRFAQSCLDKKEFLRVISFFDQTAVSKDISKQTPVIRFFYYYS
VYLHLERNRLGLGIGGEKYGKDRKINIAKYSELKTALEKLADETDPYLIYLLGMIYKRLY
SYSQAQTCFVKAVLLLPRCFPAWYELARLPIREYDFPSMPLPNHWMKILMTVEYYLYRNQ
PARAMEQFDRLPIALKHSTLIGNYFSAQIFSKLGEFESARASYEMIMRLDDQCMWWRTAY
ANYLMSVEKSNESLAAIAYESHVTNAFSFDTEMVYGIYSSLYYNDIQQSKAVLHYRHALA
MNSDSAQAWTMLGHSLQLMENSVGAMFAYERALERDPFDVRALYYLGLLYQEHKKDVFAL
YYLLSALSLATDNVKIADRAFKLVDRLSDGTRHCRVRLSEQGLTKDWFLSMWNLLECMIH
SP
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atggcttcagatgtggccataaagggcgatgaagtgcaagattttcgacttccatccgat
gagacgttcattcacgatatgtggctaacgtattgcgattgtcaggaacgtcgtctactt
gaatattcgtatttattaattgaaactgcagtttcgtttaattcagaacttcaacaagtc
caactaccgaagacagaatattcgtctttgccaattcaagatcgaatatccatccgcttt
gctcagtcgtgcttggataaaaaggaatttttgcgagtgatttctttctttgaccaaact
gcagtgagcaaggacatctctaaacaaacgccggtgattcgatttttttattattattct
gtgtatttgcatttggagagaaatcgacttggattgggcattggcggtgaaaaatatggt
aaagatcggaaaataaatattgcaaaatattcagaattgaaaaccgctttggaaaaattg
gcagacgagaccgatccatatttgatatatttgctcggtatgatctacaagcgattgtac
tcgtacagccaggcgcagacttgctttgttaaagcggttttgttgttgccacgctgtttt
ccagcttggtacgagctggcgaggcttccaattcgagaatacgattttccaagcatgccg
ttgccgaatcattggatgaaaattttgatgaccgtcgaatattacttgtaccgtaatcag
ccggcgcgtgctatggaacagttcgaccgtttgcccatcgctttgaagcacagtacgttg
attggcaattatttttccgcccaaattttcagcaagttgggtgaatttgaaagtgctcgt
gcttcgtacgaaatgatcatgcgtctcgacgaccagtgcatgtggtggcgtacggcttat
gcaaattatttaatgtctgtggagaagtcgaacgagtcgttggcagcgattgcctacgaa
tcgcacgtgaccaatgcgttttcgttcgacactgagatggtgtacggtatctattcgagc
ttgtattacaacgacatccagcagagcaaagctgtacttcactacagacacgccctcgcg
atgaattccgactcggcccaagcgtggaccatgcttgggcacagtttgcagttgatggag
aacagcgttggagccatgttcgcttatgagcgtgctctggaacgggatccgtttgacgtg
cgcgccttgtactacctcggcttgctttatcaagagcacaagaaggatgtttttgcgctt
tactatttgttgagcgccctgagtttggcgacggataatgtaaaaattgccgaccgtgca
tttaaattagtcgatcgtttgagcgatggaactcgtcactgtcgggtccgcttgtccgaa
caaggcttgaccaaagattggtttttgtccatgtggaacctcctcgaatgtatgatccac
agcccttga
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integrated database retrieval system
