Trichinella spiralis: Tsp_06952a
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Entry
Tsp_06952a CDS
T01609
Name
(RefSeq) eukaryotic translation initiation factor 2C 4
KO
K11593
eukaryotic translation initiation factor 2C
Organism
tsp
Trichinella spiralis
Pathway
tsp04361
Axon regeneration
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09150 Organismal Systems
09158 Development and regeneration
04361 Axon regeneration
Tsp_06952a
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_06952a
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_06952a
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
Tsp_06952a
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
Tsp_06952a
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
Tsp_06952a
microRNA pathway
RISC loading complex
Tsp_06952a
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoMid
ArgoN
ArgoL1
ArgoL2
Motif
Other DBs
NCBI-GeneID:
10903242
NCBI-ProteinID:
XP_003380804
LinkDB
All DBs
Position
Unknown
AA seq
913 aa
AA seq
DB search
RSGAPRTGEQRSGARRTGEQRGGAPRTGEPRSDAPATGEQRRMQHQSPRQYAPAQGMQQT
EASFGQMSLKEKMYEAGVEEFDLSKLSGRCVINYAQRNSFGSMGTAIDLHTNYFSIKIPK
DLTFHHYSVEILLTVNRRKGTVDVCTYRLSSVLYENLQDAVEYTITTPQGKAKITIKPCN
PLLIHIQDVIYALVHIGSDSERSALQALDIATSMKLFDTEVMSFGNKFFKPVANKLSIGG
GVELYDGLFKSLRPMLGAASVKAAFYTSQPLLQSLQEELRLSHIPNKPLHEQQIAQLNKK
YPSTHNAFESFIQDPGLFRQNSPDACVKFLALTLNAHHHFTDDNGVNTTVFDYFRNKYNI
ILRYPNLQMVKKGHTFIPPELCNVEPNQRVPMMKLDDENHRMIVQTCAVPPVQRYREILA
KSNAVGGDCHDLFAAAMGLTKSSDMVCIKGRVLPEPSVQYQSDAKNSGRVQVRNGQWDMK
QNKVFVAAEISHWALCNMCPTIQQPQLVQFVHLLVQKAASMGINMNPRPVSYDCFHPREA
LERMKTYFDFLIRQRDATYAICVIPEKSEVLRRSIKYYGEVVNGVVTQILLRNTVMKGFL
GRKSETLYMQIMLKVNAKNGGVNNEISMAHPIANMWFRGDLLFMGFDVNHPPALSRREKE
SGEVPLEPSVVGSSVDNAYGMFAVCNCGRTQFDYRIRYRLQDSRKEEIEREKIVGVVMEF
LKEYQNNNKNTLPKSVVVYRDGVSESQFEMVLESEKASLQEAFGRFRRGYSPKLTIVIVQ
KRHHTRFFRTDMNPSDKNMYQNIPAGTVVDTGPGTSRPTLYTVLYDENEFNANAMQGITY
LLCQTYQRCNKSVSIPAPVYHAHHAATRGKELYCAYRNKMMEEGGGSELTADFVRLEEAI
NSKPVIQQKMTWA
NT seq
2744 nt
NT seq
+upstream
nt +downstream
nt
caaggagtggtgccccaagaactggtgagcaaaggagtggtgcgcgaagaactggtgagc
aaaggggtggtgccccaagaactggtgagccgaggagtgatgcgccagcaactggtgagc
aaaggagaatgcaacatcagtctcccagacagtatgctccagcacaaggaatgcagcaga
cggaggcgagttttggacaaatgtcgttaaaagagaaaatgtatgaagccggcgttgaag
agtttgatttgagcaagttgtcagggcgttgcgtcatcaactatgcacaaagaaattcat
ttggaagcatgggaacggcgatagatttgcatacaaattatttttctattaaaattccca
aagacttgacttttcatcattacagcgttgaaattttgttgactgtgaaccgtcgcaagg
gtactgtagatgtttgcacctatcgattgtcgtcggttctgtatgaaaatttacaagacg
ctgtagagtacactattacgacaccacagggcaaagcgaaaattacaatcaagccttgta
atccgttacttattcacatacaagacgtgatttatgctttggttcatattggcagtgatt
cggaacgcagcgctttgcaagcattagacatcgctaccagcatgaaattatttgatacgg
aagtcatgtcatttggaaataaatttttcaaacccgttgctaataaactgagcattggag
gcggcgttgaactttacgacgggctttttaaatcattgcggccaatgttgggagctgcgt
ctgtgaaagcggctttttatactagtcagcctcttttgcaatctttgcaagaagaattac
gattgagccatatcccaaacaagcctctgcatgaacaacaaattgcgcagttgaataaaa
agtatccgagtacgcacaacgcatttgaatcgttcattcaagatccagggcttttccgac
aaaattccccggacgcatgtgtaaaatttttagcattaacattaaatgcacatcaccatt
ttaccgatgacaatggtgttaatacaacggtgttcgactattttagaaataagtacaata
ttatcttgagatatccaaatttgcagatggtgaaaaaaggtcatacatttattccaccag
aattgtgtaatgttgaaccgaatcagcgggttccaatgatgaagctcgatgatgaaaatc
acagaatgatcgtccaaacctgcgccgtaccacctgttcaacgttatcgtgaaattctag
ctaagagtaatgcagttggtggtgattgtcacgatttatttgctgcagctatgggtttga
ctaaaagttcggatatggtttgtataaaaggcagagttttgccggaaccatctgtgcagt
atcagtctgacgcaaagaattctggtagagtgcaagttagaaatggtcagtgggatatga
agcagaataaagtttttgtcgccgcagagatttcgcattgggctttgtgcaatatgtgcc
ctactatacagcaacctcaattagtacaatttgttcatctcctagtgcaaaaagctgcta
gtatgggtattaatatgaatccacgtcctgtaagctatgattgtttccacccacgggaag
ctttagaaaggatgaaaacctatttcgactttttaattcgtcagagggatgcaacttacg
ccatatgtgtgattcctgaaaaaagtgaagtattgcgaaggagtataaaatattatggag
aagttgtgaacggcgtagtgacgcagatattgttgcggaataccgtcatgaaaggttttc
taggcaggaaatctgaaacgttgtacatgcaaataatgctcaaagtgaacgccaaaaatg
gtggcgtgaacaatgaaatttccatggcacatccaatcgcgaatatgtggtttcgtggag
atctgctatttatgggatttgatgtgaatcatcctccagcgttgagtcgcagagaaaagg
aaagcggtgaagtaccattggaacccagtgttgttgggagtagcgttgataatgcgtacg
gtatgtttgccgtgtgtaattgcggtcgaacgcaattcgactacagaatccggtaccgtc
tgcaagattcgaggaaggaagaaatcgaacgtgaaaaaatagttggtgtggtgatggaat
ttttgaaggaatatcagaataataataagaataccttgccgaaaagtgtcgttgtttatc
gagatggtgtatctgaatcgcagtttgaaatggttttggaatcggaaaaagcatctttgc
aggaagcgtttggcagattcagaaggggctattcaccgaaactgaccattgtcattgtac
aaaagcgtcatcatacgagatttttcagaacagatatgaatccgagtgacaaaaacatgt
atcagaatattcctgccggtactgtggtcgacactggtccgggcaccagcagaccaactt
tgtatactgttctttacgatgaaaatgaattcaatgccaacgccatgcaaggtatcacat
atttgttgtgtcagacttaccaaagatgcaacaaatcggtcagcataccggcaccagttt
atcacgctcatcatgctgcaactcgtggaaaagaattgtactgcgcttacaggaataaaa
tgatggaagaaggaggaggtagtgagttgacagccgactttgtgcgtttggaagaagcga
taaattcgaaacctgtgattcagcagaaaatgacttgggcgtga
DBGET
integrated database retrieval system
