Trichinella spiralis: Tsp_06996
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Entry
Tsp_06996 CDS
T01609
Name
(RefSeq) Sel1 repeat family protein
KO
K14026
SEL1 protein
Organism
tsp
Trichinella spiralis
Pathway
tsp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Tsp_06996
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sel1
Ribosomal_uS5m_N
Ribosomal_S5_C
TPR_11
Motif
Other DBs
NCBI-GeneID:
10903287
NCBI-ProteinID:
XP_003380849
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All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MKTVNFNRVFFVFYVFYFATLIGNLLGNNRLESAVLDDAEIVTESDESKDVHSVPLYEQS
SEKVKNAQAESTPDFQTDHETSESQVEFPKGKKYYEEALTHVTGNFFRNKADMKRGYELL
TKAAEFDHTGALEYLAFMYLFGDSAPWNVNKSKEIFLHLAKRGSPKGQTGLGFLYAAGLL
TNSSQADGYRYFTGTNVPQNCESALSHYRKVAKQVIDKVTFSGFISSQRIYLSDEMADLN
ANSQAIIEENMLQYYKFLADKGDRNSQIGLANLYLSGARGIEQNVYLAYHYYLTAATAGS
GTALAFLGKMYLDGTPATPADPATAFQYFSKAADKGNTLGYSGLGHMYYTGRGTEQNFSK
AFKYFNLAAEQGSPEGQVYLGTMYYHGWGVTQNLPAALKLFHLASQSGNVVAYYNLGQMH
AMGLGVARSCSTAVEFYKNVAERGVWSTMLMDAYLAYQNGLYDQSVVQYLFMAELGYETA
QTNAAYILDRGQLIYLSKNSINQRAFLLWKHSAEQGNGFSRVRVGDYHYYGIGTPVNYEE
AAANYKTATELQRNPQAMFNLGYMHEKGIGIKQDLHLAKRFYDMALEVSADAALPVTLAL
VKLSILFTLEKLQHGEWWRLEFMESTFGSFWDLYIITAIGASISSAERLWKSVTSVSNVG
RRKGRARSVRKAKDLNRGQTIGSGKINTLWPGLNSALTIGQQMLEPKYLPPDPEREQKLL
KLREVTRVSRLKLHPLERGWSGTSLKGRKLGPPPCIAERASLLFAFILFMLMTEGSGTFF
VFDFRRKFRSIQDSCSGNEIGASHDCEAWSSEADQSLSCSCYEIICLNCFLKLVYQDFWA
ECRSTQIFAQRMPEGYGLRCHRALKSICELVGIKNLYAKVEGNTRCYQSLTKAFFTGLLN
QETYQQLADRKRLLVVEFAKEKDYFPKVIARPSGEESVRRDSEIDKDEVLDVDDLYGEGR
YPYKRPKRKPFWINQAGYLHKLWKEHPKRNMDEVKIRLLAEGIIADDTVESRVLRRDQEQ
RLVVEGEIPLPIGIGLSEVFVLGCGSEKIEQNITNEIYFACLGFTEQVQNVSCCSEADSM
FANVFRFVPAGQSVHAEAEKSEKNTQSCVQFDRIIDQCSSRISESETVFCLFNPGASDLP
LKLFEAGAKRMIILESDIEFVSQWQIQ
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgtaaattttaatcgtgtattttttgttttttatgtattttactttgcaaca
ctgattggtaacttgttaggaaataatcgtcttgaatcggccgtgcttgatgacgccgaa
atagttactgaatcagatgaaagcaaagatgtgcattcagttccattgtacgaacagagt
tcggaaaaagtgaaaaatgctcaggctgaatcaacacctgactttcaaactgaccatgaa
acaagtgaaagtcaggtggaatttccgaaaggcaaaaaatattacgaagaagcgttaacg
catgtaactggtaatttttttcgaaataaagctgatatgaagaggggttacgagttgttg
accaaagctgcagaatttgatcacacgggagctttggaatatttagctttcatgtatttg
tttggcgacagcgccccgtggaatgtgaataagtccaaggaaatctttctgcacttggcc
aaaagaggttcaccgaaaggtcagactggcttgggatttctctacgctgcgggtctactg
actaattccagccaagcagatggttatcgctattttactgggacaaatgttcctcagaac
tgtgaatcagcgttgtcacattatcgaaaagttgcgaagcaagttattgacaaagtgaca
ttttctggctttattagttcacaaagaatttatttatcggatgaaatggcagatttgaat
gccaactctcaagctatcattgaagagaatatgctgcagtattataaatttttggcagac
aaaggagatcgcaattctcagattggacttgctaatctttatctgtctggagccagaggc
attgaacagaatgtttatctagcttatcattattatttgacagctgccactgcaggtagc
ggtactgcgttggcctttttaggcaaaatgtatttggatggaacccctgctactccggca
gatcctgcgactgcttttcaatatttttcaaaagctgcggataaaggaaacactctcggt
tatagtggacttggtcacatgtattataccggaaggggaacggagcaaaatttttccaaa
gcatttaaatatttcaatcttgccgcggaacagggaagtccagagggtcaagtctatctc
ggcaccatgtattatcatggttggggtgtaactcaaaatcttcctgctgctttgaaatta
ttccatttggcaagtcagtcaggcaacgtagttgcctattacaatcttggccaaatgcat
gccatgggtttgggcgtagctcgtagttgttcaactgcagttgagttttataaaaatgtt
gctgaacgtggagtgtggtcgacgatgcttatggatgcatatttggcatatcaaaacggg
ttgtacgatcagtcggtggttcagtatttgttcatggcagagcttggttatgaaacggct
caaacaaatgcagcttatattctcgatcgaggccaattgatttatttgagcaaaaattca
ataaatcaacgagcgtttttattgtggaagcacagtgcagagcaggggaatggtttttcc
cgagtgcgagttggtgattatcattattacggtattggaacaccagtgaattacgaagaa
gctgcggcgaattacaaaacggcaacagagttgcaacgtaatccgcaggcgatgttcaac
ttgggatacatgcatgaaaaaggaatcggcatcaagcaagatttgcatttagccaagaga
ttctacgacatggcgttggaagttagtgccgatgctgctttaccggttacactggcgttg
gtcaagttgtccattctttttacattggaaaaattacaacacggtgaatggtggaggttg
gaattcatggaatcgacatttggcagtttttgggatctttacattattacggccataggc
gcttcgatatcttcggcagaacgtttgtggaaaagcgtcacttcagtgagcaacgttggt
cgtaggaaaggccgggcgcggtcggtgagaaaagcgaaagatttgaaccgtggtcagacg
attggttcaggaaaaattaataccctgtggcccggcttgaattcggcactgaccattggt
cagcaaatgttggagccgaaatatttgccgccggatcctgaacgtgaacaaaagctgttg
aagctgcgcgaagtgacccgagtgagtcgtttgaagttgcatccgttggaaaggggctgg
tctgggacttcgttgaaaggtcgtaagcttggtcctcctccatgtattgcggaacgtgcg
tcgttgttgtttgcttttattctttttatgcttatgactgaagggagtggtacctttttt
gtgtttgattttagaagaaaattccgatcaattcaagacagttgttctggaaacgaaatc
ggtgcgtcacatgactgcgaggcttggtcaagtgaagcggatcagtctcttagctgtagt
tgttatgaaataatatgcttaaattgctttttgaaattagtttatcaggatttttgggct
gaatgtcgttcaacgcaaatatttgcgcaaagaatgccagaaggttatggtttgcgctgt
caccgggcattgaaaagcatttgtgagttggttggaataaagaatttgtacgccaaagtc
gaaggcaacactcgttgctatcaatcattgacgaaagcttttttcacgggtttgctaaac
caggagacataccagcagttggctgatcgtaagcgactgttggttgtggaatttgcaaaa
gaaaaagactactttccaaaagtgatcgctagaccatctggggaggaatcagttagacga
gattcagaaattgacaaagacgaagtattggatgtggacgatctttacggagaaggtcga
tatccgtacaaaagacccaagcgaaagcccttttggatcaaccaagcaggatatttgcac
aaactatggaaagagcacccaaaacgtaacatggacgaagtcaagatacgtctcttggct
gaaggcattatagcggacgatacagttgaaagtagagtattgagacgagatcaagagcag
agacttgttgttgaaggcgaaattccattgcctataggaataggtcttagtgaagttttt
gtacttggatgcggaagcgagaaaattgaacaaaatataacaaatgaaatttatttcgcc
tgtcttgggtttaccgaacaagttcagaatgttagctgttgttcggaagcagacagcatg
tttgcgaatgtgttccgatttgttccagccggacagtctgttcacgccgaagccgagaaa
agtgaaaaaaacacgcagtcgtgcgttcagtttgatcgaatcatcgatcagtgcagcagc
agaatatcagaatcagagacggtattttgccttttcaaccctggtgcgagcgatcttcca
cttaaattatttgaagcgggagcaaaaagaatgatcatcttagagtcggatattgaattc
gtcagccaatggcagatacagtaa
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integrated database retrieval system
