Trichinella spiralis: Tsp_07031
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Entry
Tsp_07031 CDS
T01609
Name
(RefSeq) ATP-dependent RNA helicase DDX24
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tsp03009
]
Tsp_07031
Enzymes [BR:
tsp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Tsp_07031
Ribosome biogenesis [BR:
tsp03009
]
Eukaryotic type
Pre-60S particles
Helicases
Tsp_07031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA
AAA_22
Motif
Other DBs
NCBI-GeneID:
10903324
NCBI-ProteinID:
XP_003380886
LinkDB
All DBs
Position
Unknown
AA seq
654 aa
AA seq
DB search
MKTKKKKKSNLPDEISIKSTDETFDFLTDFEEITDYTCLKSTTINDKKNTSKKRKLKNKQ
SRAIIDKQEASGKKSKLESFESVDENYVPGKKLKKWQELFVPEEILHALDDLEYFEPTPI
QALCLPPAIRDRLDILGAAETGSGKTLAFGIPVIAGLLSENSDSQIHPSALILTPTRELA
IQIKDHLSSIMKYTNLKLTTATGGLSVQKQQRLLKDDPDIVIATPGRLWALISEDCEGLE
NLHKIKYLVIDEIDRMAEKQNFAEFSQLLEFLNGDENAIRKRQTLVFSATLSFVHPMPNR
LLSKANAKPLSPEEKIENLISFLSMRPKRKVIDLSSKHGLSSSLVESCLFCSTLEMKDTS
LYYFLRHYPGRTLIFANSVNCVRRLKNLLSLLKFKKYLIVIKLSDNDNTVLVATDVAARG
LDIKNVQHVVHYQVPRTAETYIHRSGRTARLNQRGLSLMLVDKQDVNNFRRVCKTLKRGK
DLPVFPVDFELMKFYSKLVRITSELESLEHRRKGVSAEKNWFQKAAKETDIILDEDVLQN
DAYALREENERNVKSRIDHLKRQLSAHLDELNRNVKTLSKYPSFNMKSAANDDATTVYLP
ESAVDAALVNVDLKKPKFVYTTKSKARQSRGKLKKNLKKGKRKLKKKGKSKRRK
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgaagaagaagaagaaatcgaatttgcctgatgaaatttcaataaaatctaca
gatgaaacgtttgattttcttaccgattttgaagagataacagattacacttgtttgaaa
tcaacgacaatcaatgataagaagaatacaagtaagaagcgtaagcttaaaaataagcag
agccgtgcaataattgataagcaagaagcaagtgggaaaaagagtaaattggaatctttt
gaatccgttgatgaaaattatgtccccggaaagaagttaaagaaatggcaagagctgttt
gtaccggaagaaattcttcatgcgttggacgatttggaatattttgaaccgacaccaatt
caagcattgtgccttcctccggcaatacgtgatcgtcttgacattttaggagctgcagaa
acgggaagtggaaaaactttggcatttggcattcctgttatcgctggcttgttgtctgaa
aattccgattctcaaattcatccttctgcactgattcttacacccaccagagaattggct
attcaaataaaagatcatttgagtagtataatgaaatatacaaatctgaaattaactaca
gctacaggaggcctttccgtacagaaacaacaacgcctattgaaggatgatccagatatt
gttattgccactccaggaagattgtgggctttgatttcagaggactgtgaaggacttgaa
aatttgcataaaattaaatacttagttattgacgaaattgatcgaatggcagaaaagcag
aatttcgcagaattttctcagttgcttgaatttttaaatggagatgaaaatgcaatcaga
aaacggcagacgttggtcttttcggccacgctttcattcgttcacccaatgccgaatcgt
cttctgtcgaaagcaaatgcaaaaccactgtcacctgaagaaaaaatagaaaatttgata
tcatttttatcgatgcgcccgaagagaaaagtgatcgatttatcatcaaagcatggtctt
tccagttcattggtcgaatcttgtttattttgtagcacattagaaatgaaagatacaagt
ttgtattattttttgcgccattatccgggacgtactttaatttttgcaaacagtgtcaac
tgcgtccgtcgattgaaaaatttattatcattgctgaaatttaaaaagtatttaattgtg
atcaaactttcagacaatgacaacaccgttttggtcgctactgatgtcgcagccagagga
ttggatatcaaaaatgtgcaacacgttgttcattatcaagtgccaagaactgccgagact
tacatacatcgcagtggacgtacggctcggctgaatcaaagaggtctcagcttgatgctt
gtcgacaagcaagatgtgaataattttcgccgcgtttgcaaaacattaaaacgtgggaaa
gatttgccagtatttccggtcgattttgaactgatgaaattctattccaagctggtacga
ataacaagcgaattagaatcactagagcacaggcgaaaaggtgttagcgctgaaaaaaat
tggtttcaaaaagctgccaaagaaaccgacattattctagacgaagatgtattgcaaaat
gatgcgtatgcgttaagagaagaaaatgaacgtaatgtgaaaagtcgaattgatcatttg
aaacgacaactttcagcccatcttgacgaattgaatcgtaatgtaaagactctttcgaaa
tatccatcgtttaatatgaaaagtgcagcaaatgatgatgctactacagtttatcttccg
gaaagtgcagtcgatgcagctttggtgaatgtggatttgaagaagccgaaatttgtctac
acgacgaaatcaaaagcaagacaatctcgtgggaaattgaaaaagaatctgaaaaaggga
aagagaaaattgaaaaagaaagggaaatccaaaaggagaaaatga
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