Trichinella spiralis: Tsp_07086
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Entry
Tsp_07086 CDS
T01609
Name
(RefSeq) putative RNA recognition motif protein
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
tsp
Trichinella spiralis
Pathway
tsp03013
Nucleocytoplasmic transport
tsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
Tsp_07086
03015 mRNA surveillance pathway
Tsp_07086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_07086
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
Tsp_07086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_5
Motif
Other DBs
NCBI-GeneID:
10897986
NCBI-ProteinID:
XP_003381394
LinkDB
All DBs
Position
Unknown
AA seq
273 aa
AA seq
DB search
MTEHNLKSRRRRSRSSSSKTSESSGSETGSDSTSKSSTESSSRSSDSSRSSSGSSGSSTS
SRSRSRNKRRSITPKRKESRRQAHSPIRSRGRHDARRRSRDRSVNRRRRSSSGSSGQNGD
VRRRRRRDSGRDADRTTRRDDRKKDVVEKEHPKKQESPKPTNLRVGNLTKNVTKDHVFEI
FSVYGPLKSVDMPLGKFNINRGFAFVQYESGEDAEKAQKHMDGGQIDGNDVSVVPAVAKP
VIRPSPPRYGGSRATGRLRGSGNWRRSPFSFFK
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atgacagagcataatttgaaaagcaggcgacggcgaagtcgttctagcagcagtaagacc
agcgaaagttcgggatcagagactgggtcggactctacttcaaaaagttctactgaatca
agcagcagaagttcggatagcagtcgttcttctagcggatcatctggctcttcaacgtcc
agtcgttctagaagcagaaacaagcggcgcagcattactcccaaaagaaaagaatccaga
agacaggcgcattcaccaattcgatctagaggtcggcatgatgcacgacgacgttctcgt
gatcgcagtgtaaatcgacgcagacgcagtagtagtggtagttctggccagaatggcgat
gtacggcgccggagacgtcgcgattctggacgagatgcagacagaacaacaagaagagat
gacaggaagaaagatgtggtggaaaaggaacatccgaaaaagcaagaatcgccgaaaccg
accaacctgcgagtgggaaatttgacaaaaaatgtgaccaaagatcacgtttttgaaata
ttttccgtctatggaccattgaaaagtgtcgatatgccgctgggaaagttcaacatcaac
cgcggtttcgcttttgtgcaatatgaatcaggagaagatgcggaaaaagctcagaagcat
atggatggaggtcagattgatggaaacgacgtatcggttgtacctgccgttgcaaagccc
gtgattcgtccatcgcctccacgttacggcggtagcagagccactggacgacttcgcggg
agtggcaattggagacgttctcctttttctttttttaaataa
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