Trichinella spiralis: Tsp_07124
Help
Entry
Tsp_07124 CDS
T01609
Name
(RefSeq) replication protein ADNA-binding subunit
KO
K07466
replication factor A1
Organism
tsp
Trichinella spiralis
Pathway
tsp03030
DNA replication
tsp03420
Nucleotide excision repair
tsp03430
Mismatch repair
tsp03440
Homologous recombination
tsp03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tsp_07124
03420 Nucleotide excision repair
Tsp_07124
03430 Mismatch repair
Tsp_07124
03440 Homologous recombination
Tsp_07124
03460 Fanconi anemia pathway
Tsp_07124
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tsp03000
]
Tsp_07124
03032 DNA replication proteins [BR:
tsp03032
]
Tsp_07124
03400 DNA repair and recombination proteins [BR:
tsp03400
]
Tsp_07124
Transcription factors [BR:
tsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Tsp_07124
DNA replication proteins [BR:
tsp03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Tsp_07124
DNA repair and recombination proteins [BR:
tsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Tsp_07124
MMR (mismatch excision repair)
Tsp_07124
DSBR (double strand breaks repair)
HR (homologous recombination)
Tsp_07124
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
tRNA_anti-codon
DUF223
zf-AN1
Motif
Other DBs
NCBI-GeneID:
10897995
NCBI-ProteinID:
XP_003381433
LinkDB
All DBs
Position
Unknown
AA seq
345 aa
AA seq
DB search
CDFRWCIRARVTRKTDIRNWSNKRGDGKLFSVDLMDESGEIRATAFNQECDRLFSVLQPK
QVYLIRGGIIKVANRQFTSIDNDYELAFSSETQVEPCKDENVHKLPLLSFRFVKFDEIPR
TNRKQLIDILGVVEKIGELEHKVARASQRELLKRDLFLIDDTKTAITLTLWGNEAENFKQ
HGHPIIAVKGVRISDFGDKNLVPVALADPNRKTETVGDNAEYFNVSGSVMYISRENCMYP
ACPSPDCNKKIADLNTGLYRCEKCNKDFPSFKWRLLLSDVDSYDAVFDNVLLKSFIFRLR
AKQEIYNDEMRMKYVCMQVYEINKLQYIGYVEEEVKRLASLPSPY
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
tgtgattttagatggtgtattcgagctcgggtgactagaaaaacggacattagaaattgg
agcaacaaacgtggagatggtaaattgttcagcgttgatttgatggatgaaagcggtgag
attcgagcgactgcgtttaatcaagaatgtgatcgtcttttcagtgttctccaaccaaag
caggtttatctaatccgtggtggtattatcaaagtagcgaacagacagttcacgtcaata
gacaacgattatgagttggcattttcctctgaaactcaggttgaaccgtgcaaagatgaa
aatgttcataaattgccgttattgtcatttcgttttgtgaaattcgacgaaattccgcgg
acgaacaggaaacagctaatcgacatactgggagttgtggagaaaattggcgaattggag
cacaaagtggcaagggctagtcaacgagaactgttgaaacgagatcttttcttgattgac
gatacgaaaacagctatcacgttgacattgtggggaaatgaggccgagaatttcaaacaa
cacggtcatccgatcatagctgtgaaaggtgtaagaatatccgattttggagataaaaat
ttggttcctgttgcgttggccgatccgaatcgtaaaactgaaactgtcggcgataatgct
gaatatttcaacgtcagtggtagcgtgatgtacatcagtcgtgagaattgcatgtatccg
gcttgtccatcaccagattgtaacaaaaagattgccgacctgaacacaggtctgtatcgt
tgtgaaaaatgcaacaaagattttccaagtttcaaatggcgtttgcttctgtctgatgtg
gacagttacgatgctgtatttgataatgttttgttgaaaagtttcatttttcgtctccga
gcgaagcaagaaatttacaatgatgaaatgcgtatgaagtacgtttgcatgcaagtttat
gaaatcaacaagctgcagtacatcggttatgtagaagaagaagttaaacgtttggcatcc
ttaccttcaccttactga
DBGET
integrated database retrieval system
