KEGG   Trichinella spiralis: Tsp_07290
Entry
Tsp_07290         CDS       T01609                                 
Name
(RefSeq) ubiquitin family protein
  KO
K08770  ubiquitin B/C
Organism
tsp  Trichinella spiralis
Pathway
tsp04120  Ubiquitin mediated proteolysis
tsp04137  Mitophagy - animal
tsp04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    Tsp_07290
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    Tsp_07290
   04137 Mitophagy - animal
    Tsp_07290
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tsp04121]
    Tsp_07290
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tsp04147]
    Tsp_07290
Ubiquitin system [BR:tsp04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   Tsp_07290
Exosome [BR:tsp04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   Tsp_07290
  Exosomal proteins of other body fluids (saliva and urine)
   Tsp_07290
  Exosomal proteins of colorectal cancer cells
   Tsp_07290
  Exosomal proteins of bladder cancer cells
   Tsp_07290
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Ubiquitin_2 TBK1_ULD OTU1_UBXL Rad60-SLD_2 DUF2604 Ubiquitin_5 Dsc3_N
Other DBs
NCBI-GeneID: 10898330
NCBI-ProteinID: XP_003381604
LinkDB
Position
Unknown
AA seq 210 aa
MQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKGKIQDKEGIPPDQQRLI
FAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKG
KIQDKEGIPPDQQRLIFAGIELYSFFVSNI
NT seq 632 nt   +upstreamnt  +downstreamnt
atgcaaatttttgttaagactctcaccggcaaaacgatcaccttggaagtagaaccatct
gatacaatagagaatgtaaagggcaaaatacaggataaggaaggaattccgccagatcaa
caacgtttgatttttgctggaaagcaattagaagacggtagaacgttgtctgattataat
atccaaaaggaaagcaccttgcacttggtgcttcgccttcgtggtggaatgcaaattttt
gttaagaccctcaccggcaaaacgatcaccttggaagtagaaccatctgataccatagaa
aatgtgaaaggcaaaattcaagataaagagggaattccaccggatcaacaacgtttgatt
tttgctggcaagcaactggaggacggcaggacattgtcagattataacattcaaaaggaa
agcaccttgcacttggtgcttcgtctccggggtggaatgcaaatttttgttaagaccctt
accggcaaaacgatcaccttggaagtggaaccatctgatacaatagagaatgtaaagggc
aaaatacaggataaggaaggaattccgccagatcaacaacgtttgatttttgctggtatt
gaattatattctttttttgtatcaaatattat

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