Trichinella spiralis: Tsp_07431
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Entry
Tsp_07431 CDS
T01609
Name
(RefSeq) serine/threonine- protein phosphatase regulatory subunit B delta
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
tsp
Trichinella spiralis
Pathway
tsp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Tsp_07431
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tsp01009
]
Tsp_07431
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tsp03019
]
Tsp_07431
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_07431
Protein phosphatases and associated proteins [BR:
tsp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
Tsp_07431
Messenger RNA biogenesis [BR:
tsp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
Tsp_07431
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
Tsp_07431
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_IFT140_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
10898645
NCBI-ProteinID:
XP_003381755
LinkDB
All DBs
Position
Unknown
AA seq
537 aa
AA seq
DB search
MLQSLLQLAALNLEYCHLNMFFCHFTILWPLTCQGVVLKPTKTSLEKYSGTFLKSRARLK
LKLLMKFGYHLSNIIHCSLVIHGISFCFEVFFVSKRIQHKENIFTLDFLLFFVSVSDSQF
VMVDSFWEKRLFRESDVISCVEFNHDGELLATGDKGGRIVIFQRDQSSHEPEFDYLKSIE
IEEKINRIRWLKRKNVAHFLLSTNDKTIKLWKVTERDKRVDGGWNLHDEYGTPRVLPRDS
SALHLPKLVPMEMVVEASRRRVFSNAHAYHINSLSVNSDQETFLSSDDLRINLWHIEITN
QSFNIVDAKPANMEDLAEVITGATFHPEHCNLFAYSSSRGTIRLCDMRDRALCDHPACVF
EEPEDTSSNTFFTEIIASVSDVKFSYCGDYLLTRDYLTLKVWDLKMQNRPLETYDVHDYL
RSRLCTLYENDCMFDKFECCWSGDNRHLLTGAYNNFFRTFNRESGTDMTLEATPELAQFH
TMLSPKRVCYGSKRRKDEFTPDALDYSKKILHCVWHPQDNIIAAAATNNLYIFNDYN
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaagtttgttacaattagctgctttaaatcttgaatattgtcatttgaatatg
ttcttctgtcatttcacgattttatggcctctgacctgtcagggtgtagttctgaaacca
acgaagaccagcctggagaaatacagtggtacttttctcaaatcaagggccagattgaaa
ctgaagttattaatgaagtttggttatcatttgagcaatattattcattgctctctcgta
attcacggtatttcattctgttttgaggtattttttgtgtcgaaacgtatacaacataag
gaaaatatatttaccttagattttttactgttttttgtcagtgtcagtgacagtcagttt
gtgatggttgattcattttgggaaaaaagactgtttcgtgaatccgatgtaatatcatgc
gttgaatttaatcatgatggtgaattgctggctaccggtgataaaggcggacgcattgta
atatttcaacgtgatcaaagcagtcatgaaccagaatttgattatttgaaatctatagaa
atagaagaaaaaataaatcgtattcgatggttgaaaaggaaaaacgtagctcattttcta
ctttcgactaatgataaaacaataaaattatggaaagtgactgaacgtgataagcgggtt
gatggcggttggaatttgcacgacgaatacggcactccccgggtattgcccagagattcg
agtgctctgcatttgccgaagttggttccaatggaaatggtggtcgaagcatcgcgccgt
cgtgttttctcaaatgcccatgcctatcacatcaacagcctttcagtgaattcagatcag
gagacatttctgtcgtcagatgatttgcgtatcaatctgtggcacattgaaatcactaat
caaagtttcaatatagttgatgcgaagccggctaatatggaagatttagctgaagtgatc
acaggagcaacttttcatccagagcactgtaatctttttgcctactcgagcagcagaggt
accattcgcctgtgcgatatgcgcgatagggcattgtgcgatcatccagcttgtgtgttc
gaagagccggaagatactagtagcaacacatttttcacggaaataattgcttcggtatca
gatgtgaaattttcatattgcggcgattatttgctcacaagagattatctcactttgaaa
gtttgggatctgaaaatgcaaaacagaccgttggaaacgtacgatgttcacgattacttg
cgtagtcgtctgtgtaccctgtatgaaaacgattgcatgttcgacaaattcgagtgttgt
tggagtggagacaatagacatttgctgactggtgcctataataatttttttcgcacattt
aatcgcgaaagcggaaccgacatgactttggaagcgaccccagaattggcgcaatttcac
acgatgctttctccgaagagggtctgctatggaagcaagcgaagaaaggatgaattcaca
ccggacgcattggattattcgaaaaaaattctccactgcgtctggcatccacaggataac
attattgctgcagcggcaaccaacaatctctacatattcaacgattacaattga
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