Trichinella spiralis: Tsp_07457
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Entry
Tsp_07457 CDS
T01609
Name
(RefSeq) deoxyribonuclease II family protein
KO
K01158
deoxyribonuclease II [EC:
3.1.22.1
]
Organism
tsp
Trichinella spiralis
Pathway
tsp04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
Tsp_07457
Enzymes [BR:
tsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.22 Endodeoxyribonucleases producing 3'-phosphomonoesters
3.1.22.1 deoxyribonuclease II
Tsp_07457
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNase_II
RNA_pol_L_2
Motif
Other DBs
NCBI-GeneID:
10898666
NCBI-ProteinID:
XP_003381776
LinkDB
All DBs
Position
Unknown
AA seq
343 aa
AA seq
DB search
MFAFFNVLALFLFINLSYSQTTKCQNRAGNGVADWTVVYKAPGQATGKIIEATAAAGNWQ
DGAVLIANDRGHSFATALQHVVGDNQDVKFLAYNNAPPGVANVKTKSNSKGVIILSTTTD
SAAWIVHTVPGFPAAKTGYSWPVAENARGHLLICLTISESQINAIAASLLLVQPLIHYND
IPKTETAAMPYFNKLAEGKISTLPPFTSRQTIRTQDANPVTVHIYSKSKSSKYEIYKKVI
VKVLKKTIKVWSRRDNILKGDCRGLQRHIRLIKSPAVVVDHNTNLEADITNWAVSDPGNI
FCHIDKPYFKNQTREPAMAICIDNINIFTRFDAIAAQLEDCPK
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcattttttaatgtgcttgcactatttcttttcattaatttatcatattctcaa
acgacaaaatgtcagaatagagctggtaacggtgtagcagactggaccgtagtttataaa
gcaccagggcaagccacaggcaaaattatcgaagcaactgctgctgctggaaactggcag
gacggagcagttttaattgctaacgatcgagggcattcgtttgcaacggcactacagcat
gtggtgggagacaatcaggatgtaaaatttcttgcttacaataatgcgccaccaggtgtt
gccaatgtaaaaaccaaatcaaacagcaaaggcgtaataatactgtctacaaccacagat
tctgcagcgtggattgtacataccgtacctggatttccagccgcaaaaacaggctacagt
tggccagtagctgagaacgccagagggcatttactaatttgcttaacaatctcagaatcg
caaataaatgcaatcgctgcatcattactacttgttcaaccacttatacattataacgat
attcctaagacagaaactgcagcaatgccatacttcaataaattggcagaaggaaaaatt
tctactcttccgccattcacatcaagacaaacaatccgcactcaagatgctaatccagtt
acagttcacatttacagtaaatcaaagtcatctaaatatgaaatttacaaaaaagtgatt
gtaaaagttttgaaaaaaacgatcaaggtatggtcaagaagagacaatattctgaaaggg
gattgcagaggtttgcaaaggcacattcgtttaatcaaaagtccagctgttgttgttgat
cataacaccaatctcgaagcagatattacaaactgggcagtttcagatcctggaaatata
ttttgtcatattgacaagccatattttaaaaatcaaaccagagaaccagcgatggcaatt
tgcattgacaacattaatatatttactcgatttgatgcaatcgctgctcaacttgaggat
tgtccaaaataa
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