Trichinella spiralis: Tsp_07497
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Entry
Tsp_07497 CDS
T01609
Name
(RefSeq) WD repeat domain phosphoinositide-interacting protein 4
KO
K22991
WD repeat-containing protein 45
Organism
tsp
Trichinella spiralis
Pathway
tsp04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
Tsp_07497
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tsp04131
]
Tsp_07497
Membrane trafficking [BR:
tsp04131
]
Autophagy
Other autophagy associated proteins
Others
Tsp_07497
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROPPIN
MRP-L28
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
BCAS3_WD40
Beta-prop_IFT122_1st
Beta-prop_EML_2
ANAPC4_WD40
Beta-prop_WDR3_1st
EIF3I
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_VPS8
CFAP251_N
Med11
Beta-prop_WDR3_2nd
Ge1_WD40
Beta-prop_WDR19_1st
WD40_Gbeta
Beta-prop_Vps41
BrkDBD
Motif
Other DBs
NCBI-GeneID:
10901983
NCBI-ProteinID:
XP_003381829
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MVTLLNSRFYDSNLLYLGFNQDHGCFACGTGCGYRIYHTDPLDEKERYDFSNGIGHVAML
YKYNYLGLVGGGLNPQFPTNEVVIWDDLERDVVIRISDLPSRVCGVRLRRDRIVVILEQM
IKVYPFSVELELLVEFETAPNSNGLCCLMGHADRALMAFPAKQPGVVRTVDLADPTISIE
IAAHESPLACMAFNNDGTLLATASEKGTLIRIFDSQNGLKLHEFRRGTNPAVIYSISFNV
DSTLLCVGSGHGTVHNRNICSGKSQYWIGKSEKNFLKKYMSAKHSFVRIQVPTVTKYNQV
PFICAFGAEPQSLIVICGDATYSLYSAEPLKKKKRIDPAIIRGRLERKKKKIEKSIRLLL
KQSKKLKPIEELTVENKVKDNIQYQTKQYNAHHNQIRVMMKSQLKALEELKLESETLYRS
ALEVNPDLIPCVFDGPVSTPPIPGYETPDGDYKETTLLLENHFIERLMCKVKYNVM
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggttactttgctcaacagtcgcttttacgattcaaatttgctgtatcttggatttaat
caagaccatggttgttttgcatgtgggacaggctgtggatacagaatatatcatactgat
ccactcgatgaaaaggaacgatatgatttctccaatggcattggtcatgttgccatgtta
tataagtataattatcttggtcttgttggtggcggcttgaatcctcagttccctactaat
gaagttgttatttgggatgatcttgaaagagatgttgttattcggataagtgacttgcca
tccagagtatgtggtgtgcgtttacgtcgtgatcgaatagttgttattttggaacaaatg
atcaaagtttatccattttctgttgaacttgaactgttggtagaatttgaaactgccccc
aattcaaatggattatgctgtctgatgggacatgctgacagagctttgatggcttttcca
gcgaagcagccgggggttgttcgcacggttgatttggccgatccgacaatttcaatcgaa
attgccgctcatgaatccccattagcatgcatggcattcaacaatgatggaactttgcta
gctactgcttcagagaaaggaactttaattcgcatctttgattctcagaatggcttaaaa
ttgcacgaattccgacgtggcactaatccagctgttatatatagtattagctttaatgtt
gactctactctactttgtgttggaagcggacatggcactgtgcacaataggaatatttgt
tctgggaaatcgcagtattggatagggaaatcggaaaaaaattttttgaaaaagtatatg
agtgccaaacatagctttgtacgtatccaagtacctactgttacaaaatacaaccaagtt
ccattcatatgtgcctttggagctgaacctcaatcgttgattgttatttgtggcgatgcg
acatattcgttatatagtgctgaaccactgaagaaaaaaaagcgcattgatcctgcaatt
ataagaggccgattggaacgaaagaagaaaaaaattgaaaaatcaattcgcttattattg
aaacaaagcaaaaagttaaagcctatagaggagttgactgtggaaaataaagtgaaagac
aatatacaatatcaaacaaagcagtataatgcacaccataatcaaattcgcgtaatgatg
aaaagtcagctgaaagcgttggaagagttgaaattggagtctgaaactttatatcgctct
gctttggaggtaaatccagatttaattccctgtgtatttgatggtccggtttcaacacca
cctatacctggatacgaaactccagatggagattataaagagacaacactattacttgaa
aatcattttatcgaaaggctcatgtgcaaggtgaaatacaatgtaatgtga
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integrated database retrieval system
