Trichinella spiralis: Tsp_07622
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Entry
Tsp_07622 CDS
T01609
Name
(RefSeq) putative G-patch domain protein
KO
K24939
CWF19-like protein 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tsp03041
]
Tsp_07622
Spliceosome [BR:
tsp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
Tsp_07622
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CwfJ_C_1
CwfJ_C_2
G-patch
G-patch_2
GVIN1_C
Motif
Other DBs
NCBI-GeneID:
10903524
NCBI-ProteinID:
XP_003381083
LinkDB
All DBs
Position
Unknown
AA seq
783 aa
AA seq
DB search
MDDEDDYMSESILAKCADVRPGIVAASVAKRYKVENAKVTADLQNRQLKSGERERVLRET
ALETAIDERNKGFLMLKKMGFTPGSALGKRPSNSELHKANEHLKEPLKLVLKNDRMGLGH
EDEEAKRAKEMAEVMRREKERLNKEYKERNRKRSNYQSLVKTFSAAQKTCYNLDISSDSD
ATPLENWYWPWFAVKKKDGLEDEDDTVKEKAHVELPESVLCRRLDELKIYFILLIEKRLK
MSLLQPYQQRILVCGDVDGNFVNLWVRMEQVLRKVGTFEMMLVCGEFFGADLQENRRVLN
GELRCTIPTYILGPLKVDSVRNYRTEAGTELGHNLIYLGKKGIFTSASGLTIAYLSGTEA
EYEDETHFSAETVDSLIGQATARANFIGVDILLTSQWPLGVEKNSSYIPDLFEDEELNCS
ALVSKLAAALKPRYHFSANTGCHYERPPYRNHKMLQEQTCHPTRFIGLARNGNPQKLKYL
FAFNIVPMKHMVRSQLIDLPANTTEFPYAEVLEELENKINIRKRKAHHSIPTTKQFFFDM
AQAEASAVDNRNSNSKKRFRTAVPQKKVNIGPCWFCLSSEEVQKHLIISIGDSAYLSLTK
GGLCDDHFLITPIGHIQSMVEADDDVLEDIEKYKESLRKFFAAQDRTVIFFERNYRTQHL
QVHAVPIANSKSMLVRQCFIQAAANHGVDMAELSEDVSLGDIASPGCPYFYAELPYGQRL
FVRRMKQFPVQFAREALTNKDLLNCPERIDWRQCALSVEEETALALKFRSLFSPYDFNQN
LLS
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaagatgattacatgtcagaaagcattctagcaaaatgtgctgatgttcgt
ccgggaatagttgcagctagtgttgctaagcgttacaaagttgaaaatgctaaggtcact
gcggatttgcaaaacagacaattaaaatctggtgaaagagaacgagttttacgagaaacc
gctttggagacagcgatagatgaacggaacaaaggttttttaatgctcaaaaaaatgggt
tttactccgggatcagctcttggtaaacgacccagtaattctgaattacataaagcaaac
gagcatttaaaggaaccactcaagttagttcttaaaaatgaccgtatgggtcttggtcat
gaagatgaagaagctaaaagagctaaagaaatggctgaagtgatgcgtagagaaaaagaa
cgtttaaataaagaatacaaagagaggaatagaaaacgttcaaattaccagtcattagtt
aaaacattttctgcagcccagaagacgtgttacaacttggatatctctagtgattcggac
gctacgcctttggagaattggtattggccttggtttgcggttaaaaagaaagatggttta
gaagatgaagatgatactgttaaagagaaagcgcatgtagaattgccagaaagtgttctt
tgcagacgattggatgaactgaaaatatattttattttgctgatcgaaaagagattgaaa
atgtcacttttacagccctatcaacaacgtatattggtctgtggtgatgtagatggtaat
tttgtgaatctttgggtacgaatggaacaagtattacgtaaagttggaacttttgaaatg
atgctcgtctgtggagaattttttggcgctgatttgcaagagaatcgccgtgttttaaat
ggagaacttcggtgcaccattcccacttacatattgggtccgcttaaagtggatagcgtt
cgcaattaccgtactgaagccggaacagaattggggcacaatttaatttatctcggaaaa
aaaggtatatttactagtgcatctggtttgacaattgcttatcttagtggcacggaagct
gaatacgaagatgagacacatttcagcgctgagacggtcgatagtttgattggtcaagct
acggccagagcgaatttcatcggagtggacattttactgactagtcagtggccacttggc
gtggaaaagaattcttcatatattccagatttgtttgaagatgaagagttgaattgttca
gcattagtttccaaattggcagccgctttgaagccaagatatcatttttccgcaaacacc
gggtgccattacgagcgtcctccgtacaggaaccacaaaatgctccaggagcaaacttgt
catcctacacgatttatcggcttggctagaaatggtaatccgcagaaattgaaatattta
ttcgcatttaacatcgtaccgatgaaacatatggttcgcagtcagctgatcgatttgcca
gccaatactactgaattcccatatgcggaagttttggaggaattggaaaataaaataaat
attcgcaaacgaaaggcccatcattctatcccaacgacgaagcaattttttttcgacatg
gcccaagctgaagcatctgctgttgacaatcgaaactctaattcgaagaaaagatttcgc
acagcagtgccacagaagaaagtgaacattggcccatgttggttttgcttgtccagtgaa
gaggtgcaaaagcatttgataatttctatcggcgacagcgcttatttgtcactgaccaaa
ggtggtctgtgcgacgatcatttcttgatcacacctattggtcatatacagtcaatggtc
gaagcagatgatgatgttcttgaagatatagaaaaatacaaagaatcattgcggaaattt
ttcgccgcccaagatcgcactgtcatattttttgaacgcaattaccgcactcagcattta
caagtgcacgctgtaccgattgcaaattcgaaatcgatgttggttcgtcagtgttttata
caggccgcagccaatcacggtgtcgacatggcagaattgtcggaagatgtttccttgggt
gatattgcttcacctggttgtccatatttttatgccgaattaccttatggtcaacgattg
tttgtgcgtcgtatgaaacaatttcctgtacagttcgcacgcgaagctttgacaaacaaa
gatttgctcaactgtcctgaaaggatcgactggcgtcaatgtgcactttctgttgaagaa
gagactgctttagcgttgaaatttcgttctttattttcaccttatgattttaatcaaaat
ttactttcttga
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