KEGG   Trichinella spiralis: Tsp_07662
Entry
Tsp_07662         CDS       T01609                                 
Name
(RefSeq) hypothetical protein
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
tsp  Trichinella spiralis
Pathway
tsp03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    Tsp_07662
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tsp03021]
    Tsp_07662
Transcription machinery [BR:tsp03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     Tsp_07662
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 10903565
NCBI-ProteinID: XP_003381123
LinkDB
Position
Unknown
AA seq 382 aa
MDSTPRIICATFMHSMQHSMESIEKCPESAEYLLKLKSPKLEYVGRSVACVGDNELVVAI
RHRKTKRTVLLPAIMVEFKPQLTADLTTSSSLLLNSPAATKNELIMSLSSQRRTLSMKAR
QVHRTLHMSGELLNIATEFISTQDDSELNNDGFSVVLPPANLKATCPQEIYNLHDIITAE
RLEKMDEFLESFFNIPNKEKQAIGCGNFVIMLAEKCQDPIQRRCLFYLSCLFRLAWLYSS
KRVVMVEDMEKAALPFSIGSKLLQVYGRSKGRFNKEKLSLSTASRDALIAHIVLLSLALN
NFSVPIQDLCTNATLSNSRVRSISRALGCNVIKSNDQQLIVLRQPPKSQSSTLQFEKATV
SFSQVKDENKQQHKIQKKRKDC
NT seq 1149 nt   +upstreamnt  +downstreamnt
atggactcgactccgcgtattatttgcgcgactttcatgcattcgatgcagcatagcatg
gaaagcatcgaaaagtgtcccgaaagtgcggaatatttgttgaagctgaaatcacccaag
ctcgaatatgttggtcgtagtgttgcttgtgttggcgataatgaactggtggttgccatt
cggcatcgaaaaacgaagcgtacggtacttttgccagccatcatggtggaatttaagccg
cagttgacggccgatttgaccacttcttctagtttgcttttgaattccccagccgccacg
aagaacgaattgatcatgtctttgagcagccagcgcaggacgctgagtatgaaagccaga
caagttcaccgcactcttcatatgtcaggcgaattgttgaacattgccacggaatttatc
agtactcaggacgattctgagctgaacaacgatggcttcagtgttgtattgcctcccgct
aatttgaaagctacttgtccccaagaaatatacaacttgcatgacatcatcaccgccgag
cgacttgaaaagatggatgaatttttggaaagctttttcaacatcccgaacaaggaaaag
caagcgattggatgtggaaattttgtcataatgcttgcagaaaaatgtcaagatccgatt
cagagacgttgtttattttatttgagttgcttgtttcggctggcgtggctgtattcgtcg
aagagggttgttatggttgaagacatggaaaaagctgccctaccattttccattggatcc
aaattgctgcaagtgtacggtcgttctaagggtagattcaacaaagagaagctgtccttg
tccactgcatcccgggatgcgctgattgcccatattgttttgctatcacttgcgctgaac
aatttttccgtcccaattcaagacctctgtaccaacgcaacgttgagcaattctcgtgta
agaagcatcagtcgagcacttggatgcaacgtgatcaaatccaatgatcagcagttgatt
gttctcagacagccgcccaagtctcagtcaagcacccttcaatttgaaaaagcaacagtt
tctttctcacaagtaaaagacgaaaacaagcaacagcataagatacaaaagaaaagaaaa
gattgttga

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