Trichinella spiralis: Tsp_07726
Help
Entry
Tsp_07726 CDS
T01609
Name
(RefSeq) 26S protease regulatory subunit 4
KO
K03062
26S proteasome regulatory subunit T2
Organism
tsp
Trichinella spiralis
Pathway
tsp03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
Tsp_07726
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tsp03051
]
Tsp_07726
Proteasome [BR:
tsp03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
Tsp_07726
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
RRM_1
Prot_ATP_ID_OB_C
AAA_lid_3
RRM_3
AAA_22
RRM_occluded
AAA_2
DUF815
RRM_5
nSTAND3
AAA_16
AAA_5
RuvB_N
Hydin_ADK
AAA_28
AAA_3
Prot_ATP_ID_OB_N
AAA_14
AAA_25
ATPase
ABC_tran
RNA_helicase
AAA_lid_PRS2_C
AAA_24
TIP49
RRM_7
IstB_IS21
NPHP3_N
AAA_33
Mg_chelatase
NB-ARC
eIF3h_C
NACHT
Parvo_NS1
Motif
Other DBs
NCBI-GeneID:
10903627
NCBI-ProteinID:
XP_003381185
LinkDB
All DBs
Position
Unknown
AA seq
646 aa
AA seq
DB search
MESTRVYVGQLTSDIRENDLENFFKGYGRIREITLKNGYGFVEFDERRDADDAVHDLNGK
PLLGEKIRVEMAHRFSRDRFASGRGGGFRGRYNGDRGYDRSRHGGRWERRRPVNPPRRSR
YRLLVENLSSAISWRELKDFMNQAGEVCFTDVYPQRREGIVEFESSSAMENALKKLNGEE
LNGRRIRITEEKLDSNKSNRNRNSVMGQQQSAHGHGFNRDKKDDKDKKRRYEPPIPTRVG
KKKRRAKGPDAAVKLPHITPHARCRLKLLKAERIKDYLLLEEEFLKNIQIAKPQEERQEE
ERGKVDDLRGSPMAVGTLEEVIDDTHAIVSTSVGSEHYVTILSFVDKDQLEPGCTVLLNH
KTHSVIGVLTDDTDPMVSVMKLEKAPKETYADVGGLDNQIQEIKESVELPLTHPELYEEM
GIRPPKGVILYGAPGTGKTLLAKAVANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVA
EEHAPSIVFIDEIDAIGTKRYESNSGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRI
ETLDPALIRPGRIDRKIEFPLPDEVTIRKIFQIHTSRMTIADNVDFEEFIMAKDDLSGAD
IKAICTEAGLQALRDRRMKVTHEDFKKARESVLYRKKEGAPSGLYI
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atggaatcaactagagtttacgttggccaattgaccagtgatatacgagaaaatgatttg
gaaaattttttcaaaggttacggccgaattcgtgaaatcacactgaaaaatggttatgga
tttgtggaatttgacgaacgtcgagatgctgatgacgctgtgcacgatttgaacggaaaa
cctctgctgggtgaaaaaattcgagtcgaaatggcgcatcgattttctcgtgaccgtttc
gcaagcggtcgtggaggcggtttccgtggtcgttacaatggtgatcgtggttatgatcgc
agccgccatggtggtcgttgggaaagacgtcggccagtcaatccgccacgtcgaagtcgc
tatcgccttctggtcgagaatctttccagtgccatctcttggcgagaactgaaagatttc
atgaatcaagccggagaagtttgttttacggatgtttatccgcagcgtcgtgaagggatt
gtggaatttgaatcgtcgtcggcgatggaaaatgctctgaaaaagttgaacggcgaagag
ttgaacggtcgtcgtattcgaattactgaagaaaaattggattcgaacaagtccaatcga
aatcgaaattcagttatggggcaacagcagtcggctcacgggcatggcttcaatcgagat
aagaaggatgataaggacaaaaagagacgatacgaacctccaatacctacccgtgtaggg
aagaagaaaagaagagccaaaggacccgacgcagcagtcaaactgccgcacatcactccg
catgctcgatgtcgactgaaactgcttaaagctgaacgtatcaaggactacctgttgttg
gaggaagaatttttgaaaaacattcaaattgcgaaacctcaagaagagcgtcaagaggaa
gaacggggaaaagttgatgatttgcgtggttcgccaatggctgtcggtacgttggaagaa
gtgatcgacgacactcatgccatcgtatccaccagtgtgggatcggagcattatgttaca
attttgtcgtttgtcgataaagatcagctcgaaccaggttgtacggtattgttgaatcat
aagacacactcggtcattggtgtactgaccgacgacactgatccaatggtgagcgtgatg
aaattggaaaaagcacccaaagaaacgtacgctgacgttgggggtctggacaatcaaata
caagagataaaagaatcggttgaactaccgttgacacatccagaactgtacgaagagatg
ggcattcgaccaccgaaaggtgtcatactgtatggagctcccggtactggcaaaactctt
ctggccaaggcggtggctaatcaaacttcggccacatttttacgagtggtcggctcagag
ttgatacaaaaatatctcggcgatggacccaagctagtacgtgagctgtttcgagttgcc
gaagagcacgcaccttcaatagtgttcattgatgagatcgacgccattggtacaaaacgt
tacgaatccaattccggtggtgagcgagaaattcaacgtacaatgttggagttgttgaat
caactggatggttttgattctcgaggcgatgtgaaagttataatggcaacgaatagaatt
gaaacgttggatcctgcgttgattcgacctggacgtattgatcgaaagattgaatttcca
ctaccagacgaagtgacgattaggaaaatttttcaaattcacacgagcagaatgactatt
gctgacaatgttgactttgaagaatttatcatggctaaagacgacttgtcaggcgctgat
attaaggcaatatgcacagaagctggcttgcaagcgttgagagataggcgaatgaaagtc
acgcatgaagatttcaaaaaagctcgtgaaagtgtgctctacagaaagaaggaaggggca
ccatcgggactttacatttaa
DBGET
integrated database retrieval system
