Trichinella spiralis: Tsp_07789
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Entry
Tsp_07789 CDS
T01609
Name
(RefSeq) 40S ribosomal protein S2
KO
K02355
elongation factor G
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tsp03012
]
Tsp_07789
03029 Mitochondrial biogenesis [BR:
tsp03029
]
Tsp_07789
Translation factors [BR:
tsp03012
]
Eukaryotic type
Elongation factors
Tsp_07789
Prokaryotic type
Tsp_07789
Mitochondrial biogenesis [BR:
tsp03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
Tsp_07789
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
Tsp_07789
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EFG_IV
Ribosomal_S5
EFG_III
Ribosomal_S5_C
EFG_C
GTP_EFTU_D2
EF-G_D2
RF3_C
ATP_synth_reg
Motif
Other DBs
NCBI-GeneID:
10903697
NCBI-ProteinID:
XP_003381255
LinkDB
All DBs
Position
Unknown
AA seq
941 aa
AA seq
DB search
MQPENWLRTRLPAFAGGAFECVELLKVTSTVLENSESRCLAGQNRFCNWYSMNVSSAGCS
RTSNESRCLSQIRLHCGLKKHCAHSMAVTPGMENLAITGSVTTSLHSISRLGHVVQERLD
PSRTDQKPFVGLAFKLEAGKFGQLTYFRIYQGRMGRGSAIVNSRTWKRTRVQRLVRMHAN
RMEDIEEAYAGDICATFGLECASGDTFLSDASRKLALENIYVPKPVVSMAIKPKAKKDAD
NFLKALNRFCKEDPTFHREYNVEAKEVIVSGMGELQLEVYAQRMKAEYNCEVELGKPKVA
FRETLTEKCAFDYWHRKQTGGHGQYGRVIGVCEPLPPNQNLDLIFTDECIGTNVPKQFMP
AIDKGFREACQKGPLIGAPVTGIRFRLKDGAHHIVDSSEIAFILTAKYAMNDVFSDGRWH
IIEPVMKVEATCPTEFQGSVMAALSKRQAVIISTDLIENFFSVVCEAPLNCMFGFVTELR
SLTEGKGEYSMEYSRYAPLKPEIAEQLISESSRAQSEVSNRTSKRLKGTCYFECFARCPS
FQLLINTPLYLFAHICRQRVSALSFVVKPKFLISWLFLYSVFCVKPRQSYIHMTDRGGFH
GGFGTSAFGEATAGFGDAGAGFGDPGVGFGEAGFGSAGGFGDSAGGGFSGSGFRGGSFAY
SRGGSSAGFGRPSFYGSGRGGRGGRGRGSRGRGRGGRGGARGKEGAKEWIPVTKLGRLVK
DGKIKSLEEIYLHSLPIKEFEIIDFLLGEQLKDDVLKIMPVQKQTRAGQRTRFKAFVAIG
DYNGHVGLGVKCSKEVATAIRGAIIAAKLSVIPVRRGYWGNKIGKPHTVPCKVSKMLRSV
TGKCGSVLVRLIPAPKGTGIVSAPVPKKLLQMAGIDDCYTCAKGSTGTLGNFAKATYAAI
AATYSYLTPDLWKGTALSRSPYQAFAEFLKSNPLSVAQEKD
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atgcagccggaaaattggcttcggacgagattgccagcatttgctggcggtgcttttgaa
tgtgttgaactgttgaaagtgaccagcactgtactggagaacagtgaatcacgttgtttg
gcgggccagaatcgtttctgcaactggtacagcatgaacgtgtcgtcggccggatgttca
agaacatccaacgaatccagatgtctatcccagatacgtttgcactgtgggttgaagaag
cactgcgcacattccatggctgtcacacccggaatggagaacttggcaatcaccggatca
gtgaccacatctttgcattccatttcacggcttgggcatgttgttcaagagcgtttggat
ccaagtagaactgatcagaaaccttttgtcggtttagcgttcaagttggaggctggaaaa
tttggtcaattgacttattttcgaatttatcaaggtcggatgggccgtggttcggcaatt
gtgaacagcagaacttggaaacgtacacgcgtgcagaggttggttcgcatgcatgcaaat
cgaatggaagatattgaagaagcttatgccggtgatatttgtgcaacctttggtttggaa
tgcgcttctggcgatacgtttttaagcgatgcaagtagaaaattagctttggaaaatatt
tatgttccaaaacctgtggtgtcgatggcgattaaaccaaaagcgaaaaaggatgcggat
aattttttgaaagcgttgaatcgattttgcaaagaagatccaacgtttcatcgtgaatac
aacgtcgaagcgaaagaggtgatcgtgtctggtatgggcgagctccagctcgaagtttat
gcgcagcgaatgaaagccgaatacaactgcgaagtggagctcggtaagccgaaggtcgcc
ttccgtgaaacccttacagaaaaatgcgcctttgattactggcatcgaaagcagactggc
ggtcatgggcaatacggtcgtgtgattggcgtctgtgagccgttgcccccaaaccagaat
ttagatttaatttttactgacgaatgcattggcacaaatgtaccgaaacaatttatgccg
gcaattgacaagggttttcgtgaagcttgccagaagggaccactgatcggggctccggtt
actggaattcgttttcgactaaaggatggcgcacatcacattgtcgactcatctgaaatt
gctttcattctgactgccaaatatgcaatgaatgatgttttcagcgatggccgttggcat
attatcgaaccggtgatgaaagtagaagctacgtgtcctacggaatttcaaggcagcgtt
atggctgcgttaagcaagcggcaagcggtgatcattagcacagatttaatagaaaatttc
ttttccgtcgtctgtgaagctccactgaattgcatgtttggcttcgttactgagctgcgt
tctttgaccgaaggcaaaggagaatattcaatggaatacagccgttatgcacctttgaaa
cctgaaatagctgaacaacttataagcgaatcttctcgcgcacagtctgaagtctccaac
aggacgagcaaaaggttaaaaggaacgtgttattttgagtgttttgctaggtgtccatca
tttcagctgctaatcaatacgccgttgtatttatttgcacatatttgcagacagcgtgta
agtgctttatcgtttgttgttaagccgaaatttcttattagttggttatttttatactct
gtattctgcgtaaaaccccgacaaagctatattcatatgactgatcgaggtggttttcac
ggaggcttcggcactagtgcttttggagaagctactgccggatttggagacgctggggct
ggcttcggtgatcccggcgttgggtttggtgaagccggctttggcagcgctggtggattt
ggagacagtgctggcggtggtttcagtggaagtggtttcagaggagggagctttgcctat
agccgtggaggatcgtctgcgggttttggtcgcccatccttttacggcagtggtcgtggc
ggtcgcggtggtcgtggtcgtggttctcgtgggcgaggtcgtgggggtcgaggtggagcc
cgaggcaaagaaggtgcgaaagaatggattccagtaactaagcttggtcgccttgtcaaa
gatgggaaaatcaaatcgttggaagaaatttatcttcactctttgccaataaaagaattt
gaaattattgactttttactcggcgaacagttgaaagatgacgtgttaaagatcatgcca
gtgcagaagcagaccagagccggacagagaacccgattcaaagcattcgttgccattggt
gattacaatggtcatgttggtcttggtgttaaatgttccaaggaagtggctacagcaatt
cgaggcgccatcattgctgctaaattgtctgtgatacctgtgcgacgtggctattggggc
aataagattggcaaaccgcatacagttccttgcaaagtgagtaaaatgttgcgcagcgtg
actggaaaatgcgggtctgttttggtccgcttaatacctgcaccaaagggaactggaatt
gtgtctgcgccagttcctaaaaagttgttgcaaatggctggcattgatgattgttacact
tgtgcaaaaggttctaccggcacacttggcaatttcgccaaagcaacgtacgcagcaatt
gcggctacgtattcttatttgacgccagatctttggaaagggacagcattgagtcgatca
ccataccaagcctttgcagaatttttgaaaagcaacccactaagcgttgctcaagaaaag
gactga
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