Trichinella spiralis: Tsp_07806
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Entry
Tsp_07806 CDS
T01609
Name
(RefSeq) putative BRCA1 domain protein
KO
K14972
PAX-interacting protein 1
Organism
tsp
Trichinella spiralis
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tsp03036
]
Tsp_07806
Chromosome and associated proteins [BR:
tsp03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL3/MLL4 complex
Tsp_07806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
zf-ANAPC11
BRCT_2
zf-rbx1
RTT107_BRCT_5
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
10903702
NCBI-ProteinID:
XP_003381260
LinkDB
All DBs
Position
Unknown
AA seq
1048 aa
AA seq
DB search
MVVRKILTENGARLSSYLTDSVSILIADHPDSSEVGEARDIYDIPVVAMSRHDANILWSI
IVSLGGECERVLTSRTTHLISFLISGNKYRIASVNDSIRIVIPQWVVDCAEAGELLSVEQ
YHPSNFVQENSADENDMKAEQEIQNLAATLKMEAQQHHVAMHQQQHHAGMNQSVSSPAPG
VSPACGFNPSVDRCYQLSPEMGANSPYQQMGPRISPQQRFWYSNNVQPPFPVQHQTQMHG
SPQQMQMIRPQQMPVSRRQSDTPLMSPSGNGSPLGSPNPAFISHSQQQYSASPMQAHHQQ
QNSFGGGYQHEMQLVGAPQRQVYMPQQNQLHQNHGQLIQQQQPRFSDSTPPNYSSAAEYA
GNAAVQLQQAKKMSLQQQQETTPIDASLQRQQFVPTTRMNQGSFPNSNQIQMQAHCQLRP
GFQRVSHPGYALPLQTSTPATISLPSGQRPTVPSYPQPYQVMQVAGSQIPNERFQSRNFQ
QPYSPRMGTTSLKESRSVRPLTQALPPKLCLVGCVFLIVDYERTLDQKEVSDWRIVINLH
GGDVEIMYSTKCTHVVCESLRHPVVQQALRDNKRCVTAQWLNDVIMNKKLLPPWKAIHFP
SFFGDNKPCKGKIFAVSGFPVKERSCLKQMILAVGAHYTAYFSRHNHLLVAKTYCGPKVM
KAAEWKIPVVNLQWLTEVFFGQTTALQNINNAKYHQFVPKELSLQPNFDPFRIDTATAMP
ILSPPPADADIQKRCAEFAKCGKNVAEVRICFTGLYQAEVNHLEKKVLWLGGKVVQLVSE
CTHLITADLKRTRKLLEGISLGRYIVSPIWIRQSYKQQQFIGTQFVVIACDNDLHICQAL
LDAGVDGASLLKEKVFIVQFAAFMFACRRAEKVLRKMHEQEQQQEEEKSPDDSTVTGLKV
KILNWNMVSTWQWDTQDPLCGICRNSFDFPCPDCKVQYDQCPIAWGECTHCFHEHCITQW
HSTQADVKDCPMCRQPWVKSADVTETPPGTPESLGAFNLSPSTGIVFVDESSKSTIHYVD
SKRNFVLSFEQHQILMKKCIREHVVHRR
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atggttgttcgaaagattttgacagaaaatggtgctcgtctgagttcttatttgactgat
tcagtcagtattctgattgctgatcaccctgattcgtccgaagtcggtgaagcaagagac
atttatgacattcctgttgttgcaatgagccggcatgatgcaaatatattatggtcaatt
atagtgtctttgggaggtgagtgtgaaagagtgcttaccagtcgaacaacacatctcatt
agtttcttgatctcaggtaacaaatatcgaatcgcatctgtgaatgattcgattagaata
gtcatacctcagtgggtggttgactgtgcagaagccggtgaattactttcagttgagcag
tatcatcccagtaattttgttcaagaaaattcagcagatgaaaacgatatgaaagcggaa
caggaaatacaaaatcttgcagcaacactgaaaatggaagcacagcaacaccatgtagcc
atgcatcagcaacaacatcatgcgggaatgaatcagtcggtttcgtcgccggcgcctggt
gtcagtccagcgtgtggatttaatccatcagttgatcgatgctatcaacttagccctgaa
atgggtgctaattctccgtaccagcagatgggtccgcgcatttcccctcagcagcgtttt
tggtattcgaacaacgtacagccacctttcccagtacaacatcagacccaaatgcatggc
tcaccgcagcaaatgcagatgattaggccgcaacagatgccagtttccagaagacagtca
gatacgccattgatgagtcccagtggaaacggaagcccattgggcagtccaaatccagca
tttatatctcattcacagcaacagtattcagcttcaccaatgcaagctcatcaccaacag
caaaatagttttggtggtggttatcaacatgaaatgcaacttgttggcgcccctcaaaga
caagtttacatgccacaacaaaaccaactccaccaaaatcatggtcaactgattcaacaa
caacagccacgtttctctgacagcactcctccgaattattcatctgctgctgagtacgct
ggaaatgcagcagttcagttgcaacaggcgaagaaaatgagtctgcagcagcaacaggaa
acaacaccaatagacgcatctttacaaaggcagcagtttgttccaacgacaaggatgaat
caaggttcatttccaaattcaaatcaaattcaaatgcaagctcattgtcagctgagacct
ggtttccaaagagtttctcatcctggttacgcattgccattgcagacatcaactccagcg
actattagtttgccatccggccagcgaccgactgtgccttcatatccccagccctatcaa
gttatgcaagttgctggaagtcagattccaaacgagcggtttcaatccagaaatttccag
cagccgtattcgcctagaatgggaacaacttccttgaaagagtcgcgcagtgttcgacca
cttacacaagcgcttccaccaaaattatgtcttgttggttgtgtttttttgattgttgac
tacgaacgcacgttggaccaaaaggaggtgagcgattggcggattgtgatcaatttgcac
ggaggggatgtggaaattatgtacagcacaaagtgtactcatgtggtttgcgaatctctt
cgacatcctgttgtccagcaggcgctcagagacaacaaacgttgcgttacagcgcagtgg
ttgaacgacgtgattatgaacaaaaagcttcttcctccttggaaagctattcattttcct
tcattttttggtgacaacaaaccttgcaagggaaaaatttttgccgttagcggttttcca
gtcaaggagcgctcttgcctgaaacagatgatcttagccgtcggtgctcattacactgct
tactttagtcggcacaaccatctacttgtagcgaaaacatattgtggtccaaaagtgatg
aaagcggcagaatggaaaatacctgtggtgaatcttcagtggcttactgaagtgttcttt
gggcaaacaactgctttgcaaaacattaataatgcaaaatatcatcagtttgtaccaaaa
gagttgagcttacaaccaaactttgatccttttcgtattgatactgcaacagcaatgccg
atattgtcaccaccaccagcggatgcggatattcagaaacgttgtgcagaatttgccaaa
tgtgggaagaatgtcgcagaggtgcgaatttgcttcaccgggctttaccaagcggaagtg
aatcatcttgaaaaaaaggtgctctggctgggaggtaaggtggtgcagctggtgtcagaa
tgcacgcacttgattactgcagatttgaagcgcactcgtaagctgcttgagggcatttca
cttggcagatacatcgtcagtccaatttggatacgccagagctacaagcagcaacagttt
attggcactcagtttgtggtcattgcttgcgacaatgatttgcacatttgtcaagctctt
cttgatgctggtgttgatggagcaagtttattgaaggaaaaagtttttattgttcaattt
gctgcattcatgtttgcttgtagaagagcagagaaggtcctaagaaaaatgcatgaacaa
gaacaacaacaggaagaagaaaaaagccccgatgatagcacggtgactggtctgaaggtg
aagattttgaattggaacatggtatcaacttggcagtgggatacgcaggatccactttgc
ggcatttgtcgcaattcgtttgatttcccatgtccagattgcaaagtccagtacgaccag
tgcccaattgcatggggcgaatgtacgcactgttttcacgaacattgcatcactcagtgg
cactccacccaggcagatgtcaaagattgtccgatgtgtcgtcagccttgggttaagtcg
gcagatgtgaccgaaacaccgccgggaacacctgaatcacttggagctttcaatttgtcg
ccttcaactggcattgtttttgtcgatgaatcatcgaaatcaacgatacattatgttgac
tccaaacgaaactttgttctctcatttgaacaacatcaaattttaatgaaaaaatgcata
cgtgagcacgttgtgcatcgaagatag
DBGET
integrated database retrieval system
