KEGG   Trichinella spiralis: Tsp_07809
Entry
Tsp_07809         CDS       T01609                                 
Name
(RefSeq) signal recognition protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
tsp  Trichinella spiralis
Pathway
tsp03060  Protein export
Brite
KEGG Orthology (KO) [BR:tsp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    Tsp_07809
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tsp02044]
    Tsp_07809
Enzymes [BR:tsp01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     Tsp_07809
Secretion system [BR:tsp02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   Tsp_07809
  Eukaryotic Sec-SRP protein
   Tsp_07809
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N CbiA NPHP3_N nSTAND3 AAA_33 MeaB AAA_17 AAA_22 AAA Zeta_toxin AAA_19 DUF2209 MobB APS_kinase ResIII AAA_16 bHLH_INO4 6PF2K AAA_31 PduV-EutP AAA_5 AAA_30 ArsA_ATPase nSTAND_NTPase5 AAA_18 Thymidylate_kin
Other DBs
NCBI-GeneID: 10903730
NCBI-ProteinID: XP_003381288
LinkDB
Position
Unknown
AA seq 492 aa
MVLAELGRKIRNAIGSLSHATIINEEVLTSMLKEVCTALLEADVNIRLVKQLRESVKSQI
NLEEMAAGMNKRRLIQRVVFQELVKLVDPGVKQWQPTKGRPNVIMFVGLQGCGKTTTCTK
LAYYYQKRGMKTCLICADTFRAGAFDQLKQNATKARIPFYGSYTEMDPVVIAAEGVEKFK
QENFEIIIVDTSGRHKQEESLFEEMLQVANTVQPDNVIYVMDASIGQACEAQARAFHEKV
DVASVIVTKLDGHARGGGALSAVAATGSPIIFIGTGEHIDDFEPFKVKPFVQKLLGMGDL
EGLIDKVNELKLDENDQLLEKLKHGQFTLRDMYEQFQNIMKMGPFSQIMSMIPGFGQDFM
SKGNEQESAKRLKRLMTIMDSMNDNELDHLKPYELFQKQQGRFGRVARGSGTSIQEVKEL
MQQYKKFAEMVKKMGSIKGLFKGGDMSSKTVNPAQLAKLNQQMAKMMDPRVLQQMGKKNL
NSIKNDVQNVNS
NT seq 1479 nt   +upstreamnt  +downstreamnt
atggttttagcggaattaggtagaaaaattcgcaatgccataggctctttaagccatgct
actattatcaatgaagaggtgttaacttcaatgctgaaagaggtatgcactgctttgctg
gaggccgatgtgaatatccgtttggtaaaacagctcagagaaagtgttaaatcacaaata
aacttggaggaaatggctgcaggaatgaataagcgccgacttattcaaagggtcgttttc
caggagcttgttaaacttgtcgatcccggcgttaaacagtggcaaccaactaaaggacgt
ccaaatgttataatgtttgttggacttcaaggttgcggtaaaacaacaacgtgcactaaa
ctagcctattattaccaaaagcgaggcatgaaaacttgtctaatttgtgcggatacgttt
cgagctggtgcatttgatcagctgaaacagaatgcgaccaaagctcggattccattttat
ggaagttatactgaaatggatcccgtagttattgctgcagaaggtgttgaaaagtttaaa
caagaaaatttcgaaataatcattgtcgacacaagcggtcggcacaaacaagaagaatct
ctatttgaagagatgcttcaagtggccaacactgtgcaaccggacaatgtgatttatgta
atggatgccagtattggacaagcctgtgaagctcaagcgcgtgctttccacgaaaaagtc
gacgttgcatcagtgatcgtgacgaaattggatggtcatgccagaggcggtggtgctttg
agcgcagtggcagctacgggcagtcctattatcttcatcggaactggcgaacatattgac
gatttcgagccgtttaaagtgaaaccgtttgtacaaaaactgcttggcatgggcgatttg
gaaggccttattgataaagttaatgaattgaaattggacgaaaatgatcagcttttggaa
aaattgaagcatgggcagttcactctgcgtgatatgtatgaacaatttcaaaatatcatg
aagatgggtccattcagtcagattatgagtatgataccaggctttggacaagatttcatg
agcaagggaaatgaacaagagtcggcgaaacgtttgaaaaggttgatgacaatcatggac
agtatgaatgataatgaattggatcatctgaaaccgtatgaactattccaaaaacagcag
ggtcgatttggacgtgttgcccgaggttcgggcacgtcaatacaagaggtgaaagaattg
atgcagcagtacaaaaagttcgccgaaatggtcaaaaagatgggaagcatcaagggactg
ttcaaaggcggtgatatgtcttccaaaacggttaatcctgctcaactggctaagctgaat
caacagatggcgaaaatgatggatcctagagttttgcagcaaatgggtaagaaaaatttg
aactcgataaaaaacgatgtacagaatgtaaattcttaa

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