Trichinella spiralis: Tsp_07810
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Entry
Tsp_07810 CDS
T01609
Name
(RefSeq) eukaryotic translation initiation factor 6
Organism
tsp
Trichinella spiralis
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FancD2
DUF7083
BUD22
Motif
Other DBs
NCBI-GeneID:
10903729
NCBI-ProteinID:
XP_003381287
UniProt:
E5S7X3
LinkDB
All DBs
Position
Unknown
AA seq
1463 aa
AA seq
DB search
MLGSRRLPNSRAAIQALKNSQSTASSAVTERSDISTACKISFIQALSDAISFDKSVDSNE
NNGEEFEYFKHTLADCALIVSGTIEKPCILNCDHVKFINELRKCLHNPDDRRKFLDQFSA
FIQDQERLKSALLPTELPKNDEGIPEDSLIRLLLRVDELQVSSRRGCMPFEHPTKALQIY
LVFIFSTQEPENEFPQLIINQFRYLERIADSRKLFSHFLKIVEIAPAWIQQEIFYCLPEL
IADDFHDEAGSALLDLMVSNPVLTNSIFETICNLTLSLQLTHEIKEMISKSLSSIDVIQL
PSRVKFLLQCNSLEDAVQTLEILREKLDFTRLFGAYLLPVLKQDKDGSVQEALKLLSSTI
ETAVHFSKFIAAAIVNFYNRKRWPPSEDSLKVFDLIMLFMLMNSRHYKQVKRILLFHIKA
GHITGNVLSDTFHFKQLLEPYFSQLIKMASDLFESVELTAQRFASSLYVELFLDIITALL
DHCTGEKAAVIGCAIDTLLALAENDVDSLCEYDFIIVEDMLFSIQKYAGSPTLGFQSIGV
VAALSALKVAFEYGGQRKTNNLHNSKQVDNITSNSSIQFCKLDETLFNQLLDFICNTTKN
SYFLSALVFDELSNIVENTDDHNRLNGTPGTRWPSSFVHPMIATENFHPIRRSLSVAAIV
QQFWTYFIRLTFLPTSSLHPALRMHIHCVQSRDQRMSNGHLLGTGNTIFASLCKMWFQQF
KCGFEFFDKLSNRPCETVERAKLCNPGYRFAGENSAHVVPLVERAARSNRSDCGNFAFHI
LNTLCDRSSTTASAQMEICTRLGALVDVEMELSKCTFEFPTVELDLFTWDYTCQRSSTFQ
AKSRRQPKTTKKKKKRASKKNKKVKKSAESEGESRDTVDPVTQLSSSEDSNAEDEANEDA
KNQQQQQQQSPSLLLTIDSSSFRELDPSVLFLLRLPLANNEAGENDNNLVADVATMRLEH
LEFLLYDLKEKLNAREDDSKRRSHWFFVYKANNKASSAAKKQQRFRQLSQLQFSNFSLSL
LPHLFARLEQLRQRLTDIVVSYDGLLDHPQSTTPTHVQNTNCVQLLLTNLNANEFKNKDK
FKHLLDEIDSVADFVDQIRIRVKYLLKFVDLAGSLQAAATVLQIAQFIIEQQQQPYANTV
DAALYQEISEVALEVLQREWQCKLTKSNKSIGHILQIYLWSNRTSRLDCLEEISKLSIGD
ALENNLTSSTYRTLNKDTFAVWYGFYLVELAEDAKNLSQDKQQQLSTQELFVKWVKSVGL
FRLLTLHVLGSKTVLRLALLHAPKYVNAFSEHAVRLLDANFRQLIEEIRPLLHAMQQSTR
TLQNACTHLKENKDRTLTKLIPGCKRTLEEFVFRIKAMMVSNNCTDALQIANLKNRNLLG
ETLMSQSSSEDNDTPKSQRQSQAASQSGRHTQAACSSVQLKSDVEDSVDEGHSDSDQGSE
QSPASMSLIGSDDETFHSYSPTV
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgttaggcagtcgtaggttgccgaattctcgggccgcaattcaagctttgaaaaattct
caatcaactgcatcgtcagctgtgactgaaagaagtgacatttcgacggcatgtaaaata
tcgtttattcaagcactcagtgatgcaatatcatttgataaaagtgttgacagtaatgag
aataatggagaagaatttgaatatttcaaacacacattggctgactgtgctcttattgtt
agtggaacgattgagaagccttgcattttaaattgtgatcatgtaaaattcataaatgaa
cttcgcaagtgcttgcataatccggatgatcgtcgtaaatttttggatcaattcagtgct
tttattcaagaccaagagcgtctgaaatcggctcttttgccgactgaactaccaaagaac
gacgaaggaataccagaagatagtttgatcagactgttacttcgggtggacgaattgcaa
gtgagcagcagacgtggctgtatgccttttgaacatcctactaaagcactgcaaatctac
ttggtttttattttttcgacgcaagaacctgaaaatgaatttcctcaactgataataaat
cagttcagatacttggagcgtattgctgacagcaggaaattattttctcactttttgaaa
atagtggaaattgctccagcttggatacagcaagaaattttttattgtcttccagaatta
attgctgatgattttcatgacgaagcaggaagtgcattattagatttgatggtcagtaat
ccagtgctgacaaattccatttttgagacaatatgcaacttgactttgtctttacaattg
acccatgagatcaaggaaatgatatctaaatctttatcgtcaattgatgtaattcaacta
ccatcgagagtgaaatttttgctgcaatgcaattcattggaagatgcagttcaaacattg
gaaattttaagagaaaaacttgattttacccgtttgtttggtgcttatctacttccagta
cttaagcaagacaaagacggcagcgttcaagaagcattgaagcttttgtctagtacaatt
gaaactgctgtgcatttttcaaaatttattgctgctgcaatagtgaacttttataataga
aaacgctggccaccaagtgaagactctttgaaggtttttgatttgataatgctgtttatg
ctgatgaacagtcgacattataagcaagtgaagcgcatattattgtttcatataaaagct
ggccacatcaccggcaacgttctttcggatacatttcactttaaacaactgttggaaccg
tatttttctcaacttatcaaaatggctagtgatttatttgaaagtgtcgaattgaccgct
caacgatttgctagcagcttgtacgtggagcttttcctcgatattattacagcattgctt
gatcattgcaccggagagaaggcagcagtgattggatgcgcgattgatactttgctagct
ttagctgaaaatgatgttgacagtctgtgcgaatatgatttcataatagtagaagacatg
ctatttagcattcaaaaatatgccggatcaccaacgttgggttttcagtcgatcggcgtt
gtggcagcgctgtccgctttgaaagttgctttcgaatatggcggacagagaaaaacgaac
aatttgcataattcaaaacaagtcgacaatatcacttccaacagcagtatacaattttgc
aaattggacgaaacgctgttcaatcaattgttggactttatctgcaatacgacgaaaaat
agctactttttgtcggctttggtgtttgacgaattgtcgaacattgtggaaaatactgat
gatcacaatcgtttgaacggaacgccagggacacgttggccaagttcatttgtgcaccca
atgattgcaacagaaaattttcacccgattcgcagatcgctttcggtagcagcgatagta
caacaattttggacgtatttcattcggttgacatttcttccgacatccagcctacatcca
gcactgcgtatgcatatacactgtgttcaaagtcgggatcaacgaatgtccaatggtcat
ttgcttggcaccggcaatacgatttttgcgtctctgtgcaaaatgtggttccaacagttc
aaatgtggatttgaattttttgacaaattgtccaatcgtccatgtgaaacagtggaacgt
gcaaaactttgcaaccctggataccgtttcgcaggtgaaaattctgcgcacgttgttcca
ctcgtcgaacgtgctgcgcgaagtaatcgatcggattgtggcaattttgcatttcatatt
ttgaatactctttgcgaccggagttcaacaaccgcgtcggcacagatggaaatctgcact
cgacttggcgcgttggtcgacgtcgaaatggaattatccaaatgcacttttgaatttcct
actgtggaattggatctgttcacttgggattacacgtgccaacgatcgtcaacatttcaa
gcaaaatctcgccgacagccgaaaacaacaaaaaagaaaaagaagcgtgcatcgaagaag
aacaagaaggttaaaaaaagtgctgaatctgaaggtgaaagtcgagatactgtcgatccg
gtcactcaactctcttcatcagaagacagcaatgccgaggatgaggcgaatgaagatgct
aaaaaccaacaacaacagcaacaacaatctccatcattattgttgaccattgattcaagc
tcgttcagggaactggacccgtcggttttatttttgcttcgccttccgttggccaataat
gaagcaggagaaaatgataataacttggttgccgacgtcgcgacgatgcggcttgaacat
ttggaatttttgctttacgatctcaaggaaaaattgaacgccagagaagatgattccaaa
aggcggtcgcattggttcttcgtatacaaggcgaataataaggcatcgtcggccgcgaag
aagcagcaacgttttcgacaattatctcagcttcaattttccaatttttctttatcactt
cttccgcatctttttgctcgtctcgaacaactgcgccaacgtttgacagatatcgtcgtt
tcatacgacggtctgctcgaccatccccaatcaacaactcccactcacgtgcagaatacc
aactgcgtgcaattgttgctgaccaacttaaatgcaaatgaatttaaaaacaaagacaaa
tttaaacatttgctcgacgaaattgattccgttgcagattttgtcgatcaaattcgcatt
cgagtgaaatatttgttgaaatttgtcgatttggccggatcattgcaagcggcggcaaca
gttttacaaattgcccaattcataattgaacaacaacagcaaccgtatgcaaataccgtc
gacgctgcgctttatcaagaaatcagtgaagtagctttggaagtgttgcaaagagaatgg
caatgcaagcttacaaaatcaaacaaaagcatcggccacatattgcaaatctatttgtgg
agcaaccgtacttccaggttggactgtttagaagaaataagcaaattgtccatcggggat
gcgttggaaaacaatttgacaagttccacttacagaacgttgaacaaagatacttttgca
gtatggtatggcttttatcttgtcgaattggcggaggatgcgaaaaatttgtctcaggat
aaacaacaacaactatcgacacaagaattatttgtgaaatgggtgaaatcggtcggtctg
ttccgactgttgactctgcacgttctcgggtcgaagacggtgctgcgtttggctctgctg
cacgcgccgaaatacgtgaacgcattttctgaacacgcggttcgacttttggatgcaaat
ttccgtcaactgatcgaagaaattcgaccattactgcacgccatgcaacaaagcacccga
acgttgcaaaacgcttgcactcatttgaaggagaacaaagaccgcacattgacaaagttg
attcctggatgcaagcgtacattggaagaattcgttttcagaatcaaagcaatgatggtg
tccaacaattgtaccgatgcattgcaaattgccaacttgaaaaacagaaatcttctgggt
gaaacactgatgtcacagtcgtccagcgaagacaacgatacaccgaaaagtcaacgacaa
tcccaagctgctagccaaagtggacgacacacccaagcagcgtgctcatcggtgcaactg
aaatcggatgtggaagacagtgtcgacgaaggccactctgattctgatcagggaagtgaa
caatcaccggcaagcatgagtctcatcggctcggacgatgaaactttccactcgtacagc
cctactgtgtaa
DBGET
integrated database retrieval system
