Trichinella spiralis: Tsp_07860
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Entry
Tsp_07860 CDS
T01609
Name
(RefSeq) sodium:neurotransmitter symporter family protein
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
tsp
Trichinella spiralis
Pathway
tsp04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
Tsp_07860
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tsp02000
]
Tsp_07860
Transporters [BR:
tsp02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
Tsp_07860
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
10903738
NCBI-ProteinID:
XP_003381296
LinkDB
All DBs
Position
Unknown
AA seq
558 aa
AA seq
DB search
MSSFVGRFTISPHLSQQNFHGITATTRGTLTLASTNPSTTDASKNSKFTGEGVAIMNRTW
QLVSEMQTILFIIGTRQSDPIHRKNILSNREVLQISDGIDNIGTLNGNLSICLLAAWVMV
FAILIRGIKSAGKVIYVLATVPYILLLVLLIRGLLLTNSMKGIEFFLIPDFSRLTSSEVW
GDAAIQVFFSMSIGAGGLSTLASYSPTNNNILRDTVVITIGNIFTSLLSGLVVFSILGYI
SGQLDTTVEQIAESGPGLLFVAYPYALSSLPVSQLWSSLFFFTVILMAIDTQVHSKINNL
YVQQIVQVQVVITAIIDQWPFLRQPCWKVTTVAFVCAVSYLIGLIMVTNVSIGGPYILNL
LDTFAGGWPLLLQCLIEVIVVAYIFGKRVKKYAALYERMLGKAPSLFWKILGYPASGFYK
LSWAFLTPACLIGVLIFNFLQYSTTTYGNYVYPLWAEILGWVIAFSTLLPVVLVALYKLI
MLFTSSTWVDAKCKFYKYFQATEKWHQNFTKQEYIDEQENTCSETISGAPSCQNLTISST
TCNSIAAIFISGFNSSVK
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcctttgttgggcgatttactatttcaccgcatctttctcagcagaacttccat
ggaatcactgctacaactcgtggaacactgacacttgcttcgacaaacccgtctacgaca
gatgcgtcaaagaacagcaaatttactggagagggcgttgccataatgaatcggacttgg
caattggtatccgaaatgcaaacaattctgtttattattggaacacgacagtccgatcca
atccatcgcaagaatattttgagcaatcgtgaagtgcttcaaatcagcgacggcatcgat
aatataggaaccttgaatggcaacttgtcgatatgtctactcgcagcatgggtgatggtt
ttcgctatacttataagagggatcaaatcggccggaaaggttatatacgtgctggcaact
gtaccttacattttgttgcttgtactgctgattcgagggttgttgttgacaaattctatg
aaaggaatagaattttttcttatccctgatttcagtcgtttaacctcttcagaagtatgg
ggagatgctgctatacaggtgttcttttctatgagtattggagcaggtggtttatcgacg
ttggcaagttacagtccaacaaacaacaacattttacgagataccgtggtcattacaatt
ggaaatatctttaccagtctgctttctggtttagttgtgttcagcattctgggatacata
tctgggcagctggacacaacagtagaacagattgctgaaagtggtcctggtctgctattt
gttgcatatccgtacgctttatcttcacttcctgtttcacaactctggtcatctttgttc
ttttttacagtcatcttaatggcaattgatactcaggtccattctaaaattaacaatctg
tatgtgcaacagattgttcaagtgcaagttgtcattactgcgattattgaccagtggcct
tttttgcgtcaaccgtgttggaaagtgacaactgttgcttttgtttgtgctgtatcctac
ttgataggactcatcatggttacaaatgtgagtattggtggtccttacattttgaatttg
ttggatactttcgcaggtggttggccactgctattgcaatgtttgattgaggttatcgtc
gtggcttacatatttggtaagcgtgtcaaaaagtacgccgctttgtacgaaagaatgctt
ggtaaagcaccgtcattattttggaaaattttgggctaccctgcatctggcttttacaaa
ctgagttgggcatttttaactccggcttgtttgataggtgttttgattttcaattttttg
cagtacagcacaacaacatacggaaattacgtatatccgctttgggcggaaatacttggc
tgggtgattgcattttcaactcttcttccagttgtactggtggcgttatacaaattgatc
atgttattcacatcatctacatgggtcgatgctaaatgtaaattttacaaatattttcaa
gctacagaaaagtggcatcagaattttaccaaacaagaatacattgatgaacaagaaaat
acttgttctgaaacaatttctggtgcaccgtcttgccagaatttgacgatctcatctact
acgtgcaactcaattgcagcaatatttatatcaggttttaactcgtcagtaaaatga
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