Trichinella spiralis: Tsp_07946
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Entry
Tsp_07946 CDS
T01609
Name
(RefSeq) putative SAM domain protein
KO
K28344
kazrin
Organism
tsp
Trichinella spiralis
Pathway
tsp04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
tsp00001
]
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
Tsp_07946
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Paralog
GFIT
Motif
Pfam:
SAM_1
SAM_2
Occludin_ELL
Exonuc_VII_L
Taxilin
Motif
Other DBs
NCBI-GeneID:
10906503
NCBI-ProteinID:
XP_003373348
UniProt:
E5SL64
LinkDB
All DBs
Position
Unknown
AA seq
881 aa
AA seq
DB search
MSYVALYIILKEKIVTAHMGDFLENEHVIFSLKHLCKWLSQMICMDWGKLFWKTILSNNE
IFIEINRCHNQLNSLRKEVAFAKRRVDDLEESMMISDSPPESDMNSQATQADQKRLRHEK
AELFNQMKELCDALEKKESHIKEFVRTLEQRVQESDMQTKQLLWEKQKLEAEYSKATEQL
SKANQQLSAQKQDLTKEQQENSRLQASLKEMQGRFLLLTGKTVYNCEGANSVSLGSVAVQ
SDDESSPVTDSEEPHFLANGGAFSQHLKSSSESTLKDSGAAFERIPFAYSFRRCRSRKDA
HAEDNGNRLSKLLHFAKSKAKVCESLDSFSEHDPITQELNLAERADYLLRARSMPLSQWK
LAHITAWLRLEMGMIHYVKAFESNVKSGKALAELSDFEMENTLGIANPMHKKKLRLALDE
YRVPSLCKYPCIKEMTHHYIGNTFLPSIGLPQYSNLFLNNLVDGRVLNALQKKHLVKHLS
VTKRLHQAAILAGIETLRMTQFDVKLLTKNRSESVNQDSHLLWWTNERVIKWVQQIDLAE
YADNLRQSGVHGALFILDSSFGFTQFAEVLRIPSSKQMPRRHLQLKFSALVAAEKNCESP
SAKLQSVISEFANDKSNGTRHQSVKNSFVKVFGLYGRRSTSDARIGHKISTDLSWLGGSE
LNRARQWAQSTGTLSSVTSDLGSSIERSKHMKAILSTPQVLAHAPMTGFISVQSGESAER
SSQSCLSPVEDEFSKSRFVRLRKKKSFNVSSRPHSMGDFCSPTRSRFIERLSGGAVPLAL
RLKNWLSSERLHGSDHLPEPERVERVMGPIAEYDCELTGVEEKTTSDSAFSSSGSSSKQS
NRCCSRERIDYILGPLERPRSLALPGECALPLRRYPHETNL
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatgttgcactttacattatattaaaggagaaaattgttactgctcatatgggt
gattttcttgaaaatgaacacgttatattttcgttaaagcatctatgcaaatggctttca
caaatgatatgcatggattggggaaaattattttggaaaacaattctatcgaacaatgaa
attttcattgaaatcaatcgatgtcataatcagttgaactcattgcgaaaagaagtcgct
tttgccaaacgtcgcgtggacgatttggaagaaagtatgatgatcagcgattcacctcca
gaatcagacatgaattcacaggcaacacaagccgatcagaaaaggttgagacacgaaaaa
gcagaattgttcaatcaaatgaaagagctttgcgacgctttggaaaaaaaggaaagtcat
attaaagagtttgttcgcactttggaacaaagagtacaagaaagtgacatgcaaacaaag
cagctattgtgggaaaagcaaaagctggaagcggaatatagcaaagcaacggaacaattg
tcgaaagctaatcagcagctcagtgctcaaaagcaagacttgactaaagagcagcaagaa
aattccaggcttcaggccagcttaaaagaaatgcagggtcgatttttacttcttaccggc
aaaacggtgtacaactgcgaaggggcgaattctgtttcactgggcagtgtggctgtccaa
agtgatgatgaatcgtctccggtgactgattcagaagagccgcattttttggcaaacggt
ggcgcattttcgcaacatttgaaatctagctcagaatcgacattgaaagacagcggtgct
gcttttgaacgaattccatttgcatattcatttcgacgatgccgcagtcgcaaagatgcc
cacgctgaagacaacggcaaccggctttccaaattgctgcactttgcgaaaagcaaagcg
aaagtttgcgaatcgttagattctttttccgagcatgatcccattacacaagaattgaat
ttggccgaaagggccgattacttgctgagagcgagaagcatgccgttgagccagtggaag
ttggctcacatcactgcatggttgagactggaaatgggcatgattcattatgtgaaagcg
tttgagtcaaatgtgaaaagtggtaaagctcttgctgaactttccgatttcgaaatggaa
aacactcttggtattgcgaacccgatgcacaagaaaaaattacgtttagccttggatgaa
tatcgtgtgccttctttatgcaagtatccgtgtataaaagagatgactcaccattacatt
ggaaatactttcttgccatcgattggactgcctcagtattcaaacttatttttgaataat
ctcgtagatggccgtgtgttgaacgctttgcagaagaagcatcttgtaaagcatctttca
gtaaccaagcgcttacaccaggcagccatattagcaggcattgaaacattacggatgaca
caatttgatgtcaagttgttgacgaaaaatcgctctgaaagcgtcaatcaagacagccat
ttactgtggtggactaacgaacgtgtaatcaaatgggttcagcagattgatttggcagaa
tatgcagataacttacgtcagtcaggagtgcacggtgcgttgttcattctcgactcttct
ttcggctttactcaatttgccgaagtgcttcgtattcccagttccaagcagatgccaaga
cgtcatttgcagttgaaattttcagctcttgttgcagcggaaaaaaactgcgaatcgcct
agtgccaagttgcaaagcgtaatcagtgaatttgcaaacgataaatcaaacggaactcgt
catcagtcagtgaaaaattcattcgtgaaagtgttcggtttgtacggtagacggtcgaca
agtgatgccagaattgggcacaaaatttcaaccgatttaagctggctaggtggttctgaa
ttgaacagagcacgacagtgggcacagtctacaggtacactgtcgtcggtgaccagcgat
ttgggaagttccattgaacgttccaaacacatgaaggcaatcctgagtacaccacaagtg
cttgcgcacgctccaatgacaggattcatcagtgtgcaaagtggtgaatctgctgaacgt
tccagccagagttgtttgtcgcccgttgaggatgaattttccaaaagtcgcttcgtgaga
ttgagaaagaaaaaatcgttcaacgtcagctctagaccgcattcgatgggcgatttctgc
tcgccaacgcgcagccgttttatcgaacgtctgtccggtggagcagtaccgttggcgctg
agacttaagaattggttgtcgtccgaacggttgcacggctctgaccatttaccggaacca
gagcgtgtcgaacgagttatgggtccaattgctgaatatgactgtgaattgaccggtgtg
gaagaaaagaccacaagcgacagcgcattttcttcgtctggttccagttccaagcagtcg
aatcgttgttgcagtcgagaacggatcgactacattctaggaccattggaacgtccacgt
tcacttgcgttgcccggcgaatgcgccctcccgcttcgtcgttatcctcatgaaacgaac
ctgtga
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